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Report for CCDS29665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29665.1 Public Mus musculus 19 Or5b122 23 108 98 CCDS HistoryNCBI Gene:258288Re-query CCDS DB by CCDS ID:29665.1Re-query CCDS DB by GeneID:258288See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29665.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074180.1 ENSMUSP00000073811.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074180.1Link to Ensembl Protein Viewer:ENSMUSP00000073811.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000074180Re-query CCDS DB by Protein ID:ENSMUSP00000073811
Original member Current member EBI ENSMUST00000215567.2 ENSMUSP00000149111.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000215567.2Link to Ensembl Protein Viewer:ENSMUSP00000149111.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000215567Re-query CCDS DB by Protein ID:ENSMUSP00000149111
Original member Current member EBI ENSMUST00000216014.2 ENSMUSP00000150019.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216014.2Link to Ensembl Protein Viewer:ENSMUSP00000150019.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000216014Re-query CCDS DB by Protein ID:ENSMUSP00000150019
Original member Current member EBI ENSMUST00000217451.2 ENSMUSP00000150779.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217451.2Link to Ensembl Protein Viewer:ENSMUSP00000150779.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000217451Re-query CCDS DB by Protein ID:ENSMUSP00000150779
Original member Current member NCBI NM_146291.1 NP_666403.1 Accepted alive Link to Nucleotide Sequence:NM_146291.1Link to Protein Sequence:NP_666403.1Re-query CCDS DB by Nucleotide ID:NM_146291Re-query CCDS DB by Protein ID:NP_666403Link to BLAST:NP_666403.1

Chromosomal Locations for CCDS 29665.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13585306 13586253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGATGCAGAATATTTCAGAACTGTCAGAATTTATTCTTCTTGGGTTAACAGATGCACCATTCCTGCAAA
CTCCTTTATTTATCATCTTTACTCTCATTTACTTGACAACATTGTTTGGGAATCTTGGAATGATTTTGCT
GATTCTGCTGGACTCCAGACTCCACACTCCCATGTACTTTTTCCTCAGTAACCTCTCTCTGGTGGACTGT
GTTTATGCCTCAGCTGTCACCCCCAAAGTGATAGAAGGGTTTCTCACAGAAAATAAGATCATATCCTACA
ATGCATGTGCTGCCCAGATGTTTTTCTTTGTAGCCTTTGCTATTACTGAGTGTTTTATTCTGGCCTCAAT
GGCCTATGACCGTCATGCAGCAGTGTGCAAACCCTTGCATTACTCCACTACTATGACAACTACGATATGT
GTCCTGCTTCTTGCTGGATCTTACTTGAGTGGACTCTTACAATCTTCCATCCATGTTTCCTTCACATTCC
ATCTTTCCTTCTGTCGTTCTAATGTAGTCAATCACTTTTTCTGTGATATCCCCCCACTATTAGCTCTTTC
TTGCTCCAGTATTCACATAAATGAAATTATACTCTTCATGTTGGCAGGATTCAATGTTGTTTTTTCCCTA
TTGGTTATATTGACCTCTTACTTACTAATTTCTGTTGCAATTGTGAGAATGCGCTCTGCTGAGAGCAGGA
AGAAGGCCATTTCCACCTGTGCATCCCACCTTACCACTGTTTCCATCTTCTATGGCACAATTATCTTCAT
GTACTTACAGCCTAGCTCCAATCACTCCATGGACACTGACAAGATGGCATCTGTTTTCTACACCATGGTC
ATTCCCATGCTGAACCCTCTTGTATATAGCCTGAGAAATAAAGAAGTCAAGAATGCAGTCAGGAAGGTTG
CTGGAAAAGCATTGTTTTCACTGGGATTAGTCAATTAA

Translation (315 aa):
MMQNISELSEFILLGLTDAPFLQTPLFIIFTLIYLTTLFGNLGMILLILLDSRLHTPMYFFLSNLSLVDC
VYASAVTPKVIEGFLTENKIISYNACAAQMFFFVAFAITECFILASMAYDRHAAVCKPLHYSTTMTTTIC
VLLLAGSYLSGLLQSSIHVSFTFHLSFCRSNVVNHFFCDIPPLLALSCSSIHINEIILFMLAGFNVVFSL
LVILTSYLLISVAIVRMRSAESRKKAISTCASHLTTVSIFYGTIIFMYLQPSSNHSMDTDKMASVFYTMV
IPMLNPLVYSLRNKEVKNAVRKVAGKALFSLGLVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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