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Report for CCDS15141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15141.1 Public Mus musculus 1 Ugt1a2 23 108 98 CCDS HistoryNCBI Gene:22236Re-query CCDS DB by CCDS ID:15141.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15141.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049289.8 ENSMUSP00000037258.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049289.8Link to Ensembl Protein Viewer:ENSMUSP00000037258.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000049289Re-query CCDS DB by Protein ID:ENSMUSP00000037258
Original member Current member NCBI NM_013701.3 NP_038729.1 Accepted alive Link to Nucleotide Sequence:NM_013701.3Link to Protein Sequence:NP_038729.1Re-query CCDS DB by Nucleotide ID:NM_013701Re-query CCDS DB by Protein ID:NP_038729Link to BLAST:NP_038729.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038729.1 533 P70691-1 533 100% 0 0

Chromosomal Locations for CCDS 15141.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 88200637 88201500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215044 88215175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88215795 88215882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88216138 88216357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88218127 88218424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1602 nt):
ATGGACACGGGACTATGTGTGCCCCTTCGAGGAATCTCAGGGCTGCTGCTCCTGCTGTGTGCCCTGCCCT
GGGCTGAAGGTGCAAAAGTGCTGGTGTTACCCATGGAGGGCAGCCAGTGGCTGAGCATGAGGGATGTTGT
GCGGGAGCTCCACGCCCGAGGTCACCAGACTGTGGTCCTGGCTTCAGAGGTGACTGTGCACATCAAAGGA
GAAGACTTCTTCACCCTCAAAACCTATGCCTTTCCATATACCAAGGAAGAATATCAGCAAGAAATACTGA
GCGACATTGAGAAGACCTTTAAAACACAACATTTTGTGAAGGCCTTTTTTGAAACTACAGCATCTATAAG
AAACTTTTTTGACCTCTACTCAAATTCTTGTATAGCTTTATTGCACAATAAGATGCTGATCCAGCAACTG
AATTCCAGTTTTTTTGATGTGATCTTAACAGACCCCATTTTCCCCTGTGGAGCAGTACTGGCCAAGTACC
TACAGATTCCTGCTGTGTTTATTCTGCGTTCTCTTTCCTGTGGCATAGAATATGAGGCCACACAATGTCC
AAATCCTTCCTCTTATATTCCGAACCTACTCACAAGGCTTTCTGACCACATGGACTTCCTGCAAAGGGTC
CAGAACATGCTGTACTATCTGGTCCTGAAGTACATTTGCCGTTTATCAATCACTCCCTATGAAAGCCTGG
CCTCTGAGCTTTTGCAGAGAGAAGTATCCTTAGTGGAGGTTCTCAGCCATGCATCCGTGTGGCTGTTCCG
AGGGGACTTTGTACTCGACTACCCCAGGCCCATCATGCCTAACATGGTCTTCATTGGGGGCATAAACTGT
GTTACCAAGAAGCCCCTCTCTCAGGAATTTGAAGCCTATGTCAACGCCTCTGGGGAGCATGGCATCGTTG
TTTTCTCTTTGGGATCCATGGTCTCAGAGATTCCGGAGAAGAAAGCCATGGAAATTGCTGAGGCTTTGGG
CAGAATTCCTCAGACGGTCCTGTGGCGCTACACCGGAACTAGACCATCGAATCTTGCAAAGAACACAATT
CTTGTCAAATGGCTACCCCAAAATGATCTGCTTGGTCATCCAAAGACTCGGGCATTCATCACACACTCTG
GCTCCCATGGTATTTATGAAGGAATATGCAATGGAGTTCCGATGGTGATGATGCCCCTATTTGGCGATCA
GATGGACAATGCCAAGCGCATGGAAACTCGGGGAGCTGGGGTGACCCTGAATGTCCTTGAAATGACTGCT
GATGATTTGGAAAATGCCCTTAAAACTGTCATCAACAACAAGAGCTACAAGGAGAACATCATGCGCCTCT
CCAGCCTTCACAAGGACCGTCCTATAGAGCCTCTGGACCTGGCTGTGTTCTGGGTGGAATACGTGATGAG
GCACAAGGGGGCACCACACCTGCGCCCGGCCGCCCATGACCTCACCTGGTATCAGTACCACTCCTTGGAT
GTGATTGGCTTCCTCCTGGCCATTGTGTTGACAGTGGTCTTCATTGTCTTTAAATGTTGTGCCTATGGCT
GCCGGAAATGCTTTGGGGGAAAGGGGCGAGTGAAGAAATCACACAAATCCAAGACCCATTGA

Translation (533 aa):
MDTGLCVPLRGISGLLLLLCALPWAEGAKVLVLPMEGSQWLSMRDVVRELHARGHQTVVLASEVTVHIKG
EDFFTLKTYAFPYTKEEYQQEILSDIEKTFKTQHFVKAFFETTASIRNFFDLYSNSCIALLHNKMLIQQL
NSSFFDVILTDPIFPCGAVLAKYLQIPAVFILRSLSCGIEYEATQCPNPSSYIPNLLTRLSDHMDFLQRV
QNMLYYLVLKYICRLSITPYESLASELLQREVSLVEVLSHASVWLFRGDFVLDYPRPIMPNMVFIGGINC
VTKKPLSQEFEAYVNASGEHGIVVFSLGSMVSEIPEKKAMEIAEALGRIPQTVLWRYTGTRPSNLAKNTI
LVKWLPQNDLLGHPKTRAFITHSGSHGIYEGICNGVPMVMMPLFGDQMDNAKRMETRGAGVTLNVLEMTA
DDLENALKTVINNKSYKENIMRLSSLHKDRPIEPLDLAVFWVEYVMRHKGAPHLRPAAHDLTWYQYHSLD
VIGFLLAIVLTVVFIVFKCCAYGCRKCFGGKGRVKKSHKSKTH


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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