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Report for CCDS44826.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44826.1 Public Homo sapiens 12 NANOGNB 24 110 108 CCDS HistoryNCBI Gene:360030Re-query CCDS DB by CCDS ID:44826.1Re-query CCDS DB by GeneID:360030See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44826.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382119.1 ENSP00000371553.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382119.1Link to Ensembl Protein Viewer:ENSP00000371553.1Re-query CCDS DB by Nucleotide ID:ENST00000382119Re-query CCDS DB by Protein ID:ENSP00000371553
Original member Current member NCBI NM_001145465.1 NP_001138937.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145465.1Link to Protein Sequence:NP_001138937.1Re-query CCDS DB by Nucleotide ID:NM_001145465Re-query CCDS DB by Protein ID:NP_001138937Link to BLAST:NP_001138937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138937.1 188 Q7Z5D8 188 100% 0 0

Chromosomal Locations for CCDS 44826.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 7765286 7765387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7769983 7770315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7770439 7770518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 7773800 7773851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGCACCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCAGATCACGAG
GTCAGGAAATCGAGACCATCTTGGCTAACAAGAAACAATCAGCTATGCCTTGGGATCAAGATCCAGAACA
ATCAACTGGAAATTACAGTGAAGATGAACAAAATGGAAAGCAGAAATGGAGAGAAGAAGGAGAAGCAGGC
AGAAAGAGAGAACGAGAAAAAGAAGAAAAAAACGAAAAGGAGCTGCAAGATGAACAGGAAAACAAAAGGA
AAAGGGAAAATGAGAAACAGAAACAGTATCCCGAGAAAAGATTAGTCAGCAAATCCCTCATGCATACTCT
CTGGGCAAAGTTTAAGTTAAACAGGTGCCCCACTATACAAGAGAGTCTATCACTGTCATTTGAATTTGAC
ATGACACATAAACAGATAAGTCAATGGTTTTGTAAAACGAGGAAGAAATATAATAAAGAAATGTCCAAGA
GAAAGCATAAGAAAAAACATATGAGATGGAGATCTCTGTGTTGCCAAGGCTGGTCTCGAACTCCTGCCCT
CAAGTGA

Translation (188 aa):
MHRARWLTPVIPALWEAEAGRSRGQEIETILANKKQSAMPWDQDPEQSTGNYSEDEQNGKQKWREEGEAG
RKREREKEEKNEKELQDEQENKRKRENEKQKQYPEKRLVSKSLMHTLWAKFKLNRCPTIQESLSLSFEFD
MTHKQISQWFCKTRKKYNKEMSKRKHKKKHMRWRSLCCQGWSRTPALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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