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Report for CCDS26759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26759.1 Public Mus musculus 13 Kif2a 23 108 98 CCDS HistoryNCBI Gene:16563Re-query CCDS DB by CCDS ID:26759.1Re-query CCDS DB by GeneID:16563See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26759.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000122233.7 ENSMUSP00000112715.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000122233.7Link to Ensembl Protein Viewer:ENSMUSP00000112715.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000122233Re-query CCDS DB by Protein ID:ENSMUSP00000112715
Original member Current member NCBI NM_008442.2 NP_032468.2 Accepted alive Link to Nucleotide Sequence:NM_008442.2Link to Protein Sequence:NP_032468.2Re-query CCDS DB by Nucleotide ID:NM_008442Re-query CCDS DB by Protein ID:NP_032468Link to BLAST:NP_032468.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032468.2 716 P28740-1 716 100% 0 0

Chromosomal Locations for CCDS 26759.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 106962139 106962224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106964341 106964476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106965018 106965119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106968638 106968788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106969704 106969817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106974495 106974562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106975371 106975481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106976656 106976860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106976986 106977128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106978024 106978115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106978972 106979035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106979477 106979567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106982524 106982686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106983192 106983246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106985064 106985159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106987269 106987369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106987953 106988075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106990038 106990092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106993163 106993279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 106993848 106993925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2151 nt):
ATGGTAACATCTTTAAATGAAGATAATGAAAGTGTAACTGTTGAGTGGATAGAAAATGGAGATACGAAAG
GCAAAGAGATTGACTTGGAGAGCATCTTTTCACTTAACCCTGACCTTGTACCTGATGAAGATATTGAGCC
CAGTCCAGAACTACCTCCACCCTCGTCATCCTCAAAAGTTAACAAAATTGTAAAGAACCGGCGGACTGTG
GCAGCTGTTAAGAATGACCCTCCCCCGAGAGATAATAGAGTGGTTGGTTCAGCACGCGCACGGCCTAGTC
AGCTTCCTGAGCAATCGTCTTCTGCACAACAGAATGGTAGCGTTTCAGATATATCTCCAGTTCAAGCTGC
AAAAAAGGAGTTTGGCCCTCCTTCACGTAGAAAATCCAATTGTGTGAAAGAAGTAGAAAAATTGCAAGAA
AAACGAGAAAAAAGGAGATTGCAACAGCAAGAACTTAGAGAAAAAAGAGCCCAGGATGTTGATGCTACAA
ATCCAAATTACGAAATTATGTGTATGATCAGAGACTTCAGAGGGAGCTTGGATTACAGACCCCTAACAAC
AGCAGATCCTATTGATGAACATAGGATATGTGTTTGTGTAAGAAAACGACCACTCAATAAAAAAGAAACT
CAAATGAAAGATCTTGATGTGATCACAATCCCTAGTAAAGATGTTGTGATGGTCCACGAACCCAAACAGA
AAGTAGACTTAACAAGGTACTTAGAAAATCAGACATTTCGGTTTGATTACGCCTTCGATGACTCAGCTCC
TAATGAAATGGTTTACAGGTTTACTGCTAGGCCACTAGTGGAAACAATATTTGAAAGGGGCATGGCTACG
TGCTTTGCTTATGGGCAGACTGGAAGTGGGAAAACTCATACTATGGGTGGTGACTTTTCAGGAAAGAACC
AGGATTGTTCTAAGGGAATTTATGCATTAGCAGCTCGCGATGTCTTTTTAATGCTGAAGAAGCCAAACTA
TAAGAAACTAGAACTTCAAGTATATGCAACATTTTTTGAAATTTATAGTGGAAAGGTGTTTGACTTACTA
AATAGGAAAACAAAATTAAGAGTACTAGAAGATGGGAAGCAGCAGGTCCAAGTGGTGGGGCTGCAGGAGC
GGGAGGTGAAGTGTGTGGAGGACGTGCTGAAGCTCATCGACATAGGCAACAGCTGCAGAACATCTGGCCA
AACATCTGCAAATGCACATTCATCTCGGAGCCATGCAGTGTTCCAGATCATTCTAAGAAGGAAGGGGAAA
CTACATGGTAAATTTTCTCTCATTGACCTGGCTGGGAACGAAAGAGGAGCTGATACATCCAGTGCAGACA
GGCAAACCAGGCTTGAAGGTGCTGAAATTAATAAAAGCCTTTTAGCACTCAAGGAGTGCATCCGAGCCTT
AGGTAGAAACAAACCCCATACGCCTTTCCGAGCGAGCAAACTCACTCAGGTGCTGAGAGATTCCTTCATA
GGTGAAAATTCTCGTACCTGCATGATTGCCACAATCTCTCCAGGAATGGCATCCTGTGAAAATACTCTTA
ATACGTTAAGATATGCAAATAGAGTAAAGGAGTTTGGAATTAGTCCTTCAGACATTCCCTTCTCCCAGGG
TGGTGGCAGTCGCCCTGATCTCTCTCCTTCTTACGATTATGACGACTTTTCTCCTTCAATTACCAGGGTG
AAAGAATTGACTGTAAATCCAGCTGCTGCTGGCGATGTCCATCCAATAATGCACCATCCACCGAGCCAGA
TTGATGACTTAGAGACACAGTGGGGTGTGGGGAGTTCTCCTCAGAGAGATGATCTAAAACTTCTCTGTGA
ACAAAATGAAGAAGAAGTTTCTCCACAGCTGTTCACTTTCCATGAAGCTGTCTCCCAGATGGTAGAGATG
GAAGAGCAGGTTGTGGAAGATCATAGGGCAGTGTTCCAGGAATCCATTCGCTGGATAGAAGATGAAAAGG
CTCTCCTAGAGATGACTGAAGAAGTAGACTATGATGTAGACTCATATGCTACACAACTTGAAGCTATTCT
TGAGCAAAAAATAGACATTTTAACTGAGTTACGAGATAAAGTGAAATCTTTTCGCGCAGCGCTACAAGAA
GAAGAGCAAGCAAGCAAGCAAATTAACCCCAAGAGGCCCCGAGCCCTCTAA

Translation (716 aa):
MVTSLNEDNESVTVEWIENGDTKGKEIDLESIFSLNPDLVPDEDIEPSPELPPPSSSSKVNKIVKNRRTV
AAVKNDPPPRDNRVVGSARARPSQLPEQSSSAQQNGSVSDISPVQAAKKEFGPPSRRKSNCVKEVEKLQE
KREKRRLQQQELREKRAQDVDATNPNYEIMCMIRDFRGSLDYRPLTTADPIDEHRICVCVRKRPLNKKET
QMKDLDVITIPSKDVVMVHEPKQKVDLTRYLENQTFRFDYAFDDSAPNEMVYRFTARPLVETIFERGMAT
CFAYGQTGSGKTHTMGGDFSGKNQDCSKGIYALAARDVFLMLKKPNYKKLELQVYATFFEIYSGKVFDLL
NRKTKLRVLEDGKQQVQVVGLQEREVKCVEDVLKLIDIGNSCRTSGQTSANAHSSRSHAVFQIILRRKGK
LHGKFSLIDLAGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKPHTPFRASKLTQVLRDSFI
GENSRTCMIATISPGMASCENTLNTLRYANRVKEFGISPSDIPFSQGGGSRPDLSPSYDYDDFSPSITRV
KELTVNPAAAGDVHPIMHHPPSQIDDLETQWGVGSSPQRDDLKLLCEQNEEEVSPQLFTFHEAVSQMVEM
EEQVVEDHRAVFQESIRWIEDEKALLEMTEEVDYDVDSYATQLEAILEQKIDILTELRDKVKSFRAALQE
EEQASKQINPKRPRAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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