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Report for CCDS17128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17128.1 Public Mus musculus 2 Fam210b 23 108 98 CCDS HistoryNCBI Gene:67017Re-query CCDS DB by CCDS ID:17128.1Re-query CCDS DB by GeneID:67017See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17128.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028995.4 ENSMUSP00000028995.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028995.4Link to Ensembl Protein Viewer:ENSMUSP00000028995.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000028995Re-query CCDS DB by Protein ID:ENSMUSP00000028995
Original member Current member NCBI NM_025912.4 NP_080188.3 Accepted alive Link to Nucleotide Sequence:NM_025912.4Link to Protein Sequence:NP_080188.3Re-query CCDS DB by Nucleotide ID:NM_025912Re-query CCDS DB by Protein ID:NP_080188Link to BLAST:NP_080188.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080188.3 190 Q9D8B6 190 100% 0 0

Chromosomal Locations for CCDS 17128.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 172345662 172345847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172351455 172351624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 172352586 172352802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGCCGGGCTGTTGACGCTGCTTGGCCCGGCAGGAAGAGTGAGCACCCGGCTGCGGCCCCTGGCCCCTT
GGCTCCTGGGAACCGCCACCTCCTGTGCTCCACCGCTCTGGGCCTTAGCCTTGTCCCATCCGGTTCCGGA
CGCCCGACTGCTGCGCACGGCCCGCGGGGACTGTCTCAGCCGCCAGGAGCCCAACAGGACCCCCGAGCCA
GGAGGCAGTGTCACCGGCACAGAGAAAAAGCTAAGCAGAACACAGCAGCTGAAGAAGGTTTTCCAAGAGT
ACGGGGCCGTGGGCGTGTCAATGCACATTGGGATCTCCCTGGTGTCCTTGGGGATATTTTACACAGTTGT
TTCCAGTGGCATAGACATGTCTGCAATCCTGCTTAAACTTGGCTTTAAAGAGTCCCTGGTGCAGTCCAAA
ATGGCAGCAGGCACCAGCACATTCGTGGTGGCCTATGCCATCCATAAGCTGTTTGCTCCCGTTCGGATCA
GCATCACCTTGGTCTCTGTGCCCTTTGTCGTCAGATACTTCCGCAGCGTTGGACTCTTTAAACCTCCAGC
CACCAAGCCTTGA

Translation (190 aa):
MAGLLTLLGPAGRVSTRLRPLAPWLLGTATSCAPPLWALALSHPVPDARLLRTARGDCLSRQEPNRTPEP
GGSVTGTEKKLSRTQQLKKVFQEYGAVGVSMHIGISLVSLGIFYTVVSSGIDMSAILLKLGFKESLVQSK
MAAGTSTFVVAYAIHKLFAPVRISITLVSVPFVVRYFRSVGLFKPPATKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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