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Report for CCDS37753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37753.1 Public Mus musculus 18 Ammecr1l 23 108 98 CCDS HistoryNCBI Gene:225339Re-query CCDS DB by CCDS ID:37753.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37753.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115808.3 ENSMUSP00000111475.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115808.3Link to Ensembl Protein Viewer:ENSMUSP00000111475.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000115808Re-query CCDS DB by Protein ID:ENSMUSP00000111475
Original member Current member EBI ENSMUST00000234413.1 ENSMUSP00000156982.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234413.1Link to Ensembl Protein Viewer:ENSMUSP00000156982.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234413Re-query CCDS DB by Protein ID:ENSMUSP00000156982
Original member Current member NCBI NM_153515.4 NP_705735.1 Accepted alive Link to Nucleotide Sequence:NM_153515.4Link to Protein Sequence:NP_705735.1Re-query CCDS DB by Nucleotide ID:NM_153515Re-query CCDS DB by Protein ID:NP_705735Link to BLAST:NP_705735.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705735.1 310 Q8JZZ6 310 100% 0 0

Chromosomal Locations for CCDS 37753.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 31771708 31772114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 31774236 31774346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 31774637 31774751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 31775987 31776077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 31778857 31778953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 31780644 31780755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGGAAAAAGACGTTGTGTTCCTCCCCTTGAGCCCAAGTTGGCAGCAGGCTGTTGTGGGGTCAAGAAGC
CCAAACTATCTGGAAGTGGAACGCACAGTCACGGGAACCAGTCTACAACTGTTCCTGGCTCAAGTTCAGG
ACCTCTTCAAAACCACCAGCATGTGGACAACAGCAGTGGTCGGGAAAATGTATCGGACTTAACTCTGGGA
CCTGGAAACTCTCCTATTACACGAATGAATACTGCATCTGGAGCCCTGAGCCCTCTCCCCCGGCCCAATG
GAACTGCCAATAGCACTAAGAACCTGGTGGTGACTGCAGAGATGTGCTGCTACTGCTTTGATGTGCTCTA
CTGTCACCTCTATGGCTTCCCACAGCCACGGCTTCCTAGATTCACCAATGACCCCTATCCTCTCTTTGTG
ACCTGGAAGACAGGGCGAGACAAGCGGCTTCGTGGCTGCATTGGGACCTTCTCAGCCATGAATCTTCATT
CAGGACTCAGGGAATACACATTAACCAGTGCACTTAAGGACAGCCGATTCCCTCCCCTGACCCGAGAGGA
GCTGCCCAAACTTTTCTGTTCTGTCTCCCTCCTTACTAACTTTGAAGATGCCAGTGACTACCTGGACTGG
GAGGTAGGGGTCCATGGAATTCGGATTGAATTCATCAATGAAAAAGGCATCAAACGCACAGCCACATATT
TACCTGAGGTTGCTAAGGAACAAGACTGGGATCAGATCCAGACAATAGATTCCTTGCTCAGGAAAGGTGG
TTTTAAGGCTCCAATTACCAGTGAATTCAGAAAATCAATCAAACTCACAAGGTATCGAAGTGAGAAGGTG
ACAATCAGTTATGCAGAGTATATTGCTTCTCGACAGCACTGTTTCCAGAATGGCACTCTTCATGCCCCGC
CCCTCTACAATCATTACTCCTGA

Translation (310 aa):
MGKRRCVPPLEPKLAAGCCGVKKPKLSGSGTHSHGNQSTTVPGSSSGPLQNHQHVDNSSGRENVSDLTLG
PGNSPITRMNTASGALSPLPRPNGTANSTKNLVVTAEMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFV
TWKTGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDW
EVGVHGIRIEFINEKGIKRTATYLPEVAKEQDWDQIQTIDSLLRKGGFKAPITSEFRKSIKLTRYRSEKV
TISYAEYIASRQHCFQNGTLHAPPLYNHYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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