NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS35697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35697.1 Public Mus musculus 1 Zranb3 23 108 98 CCDS HistoryNCBI Gene:226409Re-query CCDS DB by CCDS ID:35697.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35697.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086614.11 ENSMUSP00000083806.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086614.11Link to Ensembl Protein Viewer:ENSMUSP00000083806.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000086614Re-query CCDS DB by Protein ID:ENSMUSP00000083806
Original member Current member EBI ENSMUST00000112538.3 ENSMUSP00000108157.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112538.3Link to Ensembl Protein Viewer:ENSMUSP00000108157.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000112538Re-query CCDS DB by Protein ID:ENSMUSP00000108157
Original member Current member NCBI NM_001357573.1 NP_001344502.1 Accepted alive Link to Nucleotide Sequence:NM_001357573.1Link to Protein Sequence:NP_001344502.1Re-query CCDS DB by Nucleotide ID:NM_001357573Re-query CCDS DB by Protein ID:NP_001344502Link to BLAST:NP_001344502.1
Original member Current member NCBI NM_027678.3 NP_081954.1 Accepted alive Link to Nucleotide Sequence:NM_027678.3Link to Protein Sequence:NP_081954.1Re-query CCDS DB by Nucleotide ID:NM_027678Re-query CCDS DB by Protein ID:NP_081954Link to BLAST:NP_081954.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344502.1 1069 Q6NZP1 1069 100% 0 0
NP_081954.1 1069 Q6NZP1 1069 100% 0 0

Chromosomal Locations for CCDS 35697.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 127954967 127955065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127956537 127956668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127959710 127960100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127960759 127960869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127963761 127963903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127965063 127965164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127967878 127967969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127972947 127973144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127976139 127976544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127987997 127988146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127992800 127992979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127996853 127996972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 127999341 127999460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128016043 128016159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128017558 128017729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128032849 128032934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128036398 128036629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128040818 128040996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128057982 128058000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 128091843 128092003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3210 nt):
ATGCCTACAGCTGGTAGCAAGAAGAAGGCTCCCACACCGCAGATTTCTTGTTTAACAAGCGAATCATATA
CACAGCTGGATTTTTTACCGGACAAGCTTAGAACAAAACTGCTTCCGTTCCAAAAAGATGGCATCGTTTT
TGCCCTCAGAAGAGATGGCAGGTGTATGGTGGCTGATGAAATGGGTCTAGGAAAGACAATCCAGGCGATT
GCAATTGCTTACTTCTACAAAGAGGAGTGGCCCCTGCTGATAGTCGTCCCTTCATCTCTAAGATACCCTT
GGATAGAAGAACTAGAAAAATGGATCCCAGAGCTAGAGCCAGAGGAAATCAATGTCGTCATGAACAAAAC
TGACATTGGGAGAATCCCGGGCAGCAGAGTGACAGTTCTGGGCTACGGTCTCTTAACCACAGATGCAGAG
ACTTTGCTGGATGCACTGAACACGCAGAACTTCAGGGTCGTGATAGTGGATGAGTCACACTACATGAAGT
CCAGAACTGCTGCCCGCAGCAAGATTCTCCTGCCCATGGTGCAGAAGGCCAGGAGAGCCATTCTTCTTAC
AGGAACCCCAGCTCTGGGAAGGCCTGAGGAGCTTTTCATGCAGATTGAGGCTCTTTTCCCACAAAAATTT
GGAACTTGGATTGAGTATGCTAAAAGATACTGCAATGCACATGTCAGATACTTTGGCAAAAGGCGTCAGT
GGGACTGTAGAGGGGCATCAAACCTTAGTGAGCTTCACCAGCTCCTAAATGACATAATGATCAGAAGACT
AAAGAGTGAAGTTTTAAGCCAGCTGCCCCCGAAAGTCAGACAGCGCATTCCCTTTGACCTTCCCCCAGCA
GCTGTCAAGGAACTGAATGCCAGCTTTGAAGAATGGCAGAAACTAATGAGAGCTCCAAATTCAGGTGCCA
TGGAGACGGTTATGGGGTTGATAACACGCATGTTCAAACAGACTGCAATTGCCAAGGCAGGTGCAGTGAA
GGACTATATTAAGATGCTGCTTCAGAACGACTCCCTTAAATTTCTGGTCTTTGCGCACCATTTAAGTATG
CTCCAGGCTTGCACAGAAGCAGTCATCGAAAGCAAGTCTCGTTACATCAGGATAGATGGAAGTGTTCCAT
CTTCAGAAAGAATTCATCTGGTTAATCAATTTCAGAAGGACCCCGATACTCGTGTGGCTATCCTGAGCAT
TCAGGCTGCTGGCCAGGGTTTAACGTTTACTGCTGCGAGTCACGTTGTCTTTGCTGAGTTGTACTGGGAC
CCTGGACATATCAAACAAGCAGAAGACCGAGCTCACCGAATCGGACAGTGCAGTTCTGTGAATATTCACT
ACCTTATTGCAAATGGTACTCTGGACAGCCTAATGTGGGCAATGCTGAATCGAAAGGCTCAGGTCACAGG
GAGCACACTGAATGGCAGGAAGGAGAAACTCCAGGCTACGGAAGATGACAAGGAGAAGTGGGGTTTTCTG
CAGTTTGCTGAAGCATGGACCCCAAGTGACAGTTTTGAAGAGCTCAAGGATTCTGTGTTTACTCACTTTG
AAAAAGAGAAACAGCATGATATTCGATCATTCTTCTTACCAAAACTGAAAAAGAGACAGTTAGAAACGAC
CTGTGATGACCCAGAGGCATTCAAGGAGAAGATTACAGTGGCCTCGGACCCTAGAAAAATGGCTACAAGT
GATAGCACTGCTGACAAAAATGGGTGTGAGCCTGAAGCTAAAAGGTTGAAGTCCCTGAGCACCGAGGACC
ACAGCAGTGCCCTGGAGGAAGGACCGTCCTTGCAAGCCAGAGCCACATCCATGGAAGTTGTCCATGAGGT
CAAGCCCCCATTGGCTTCTCCAGCCCTTCCTGAGAAGGGATGGCAGTGTGGCTTCTGCACATTCCTCAAC
AACCCAGGCCTTCCATACTGTGAGATGTGTGAGAACCCTCGGAGCAGAGCTGCTGGCCGCAACCATCTTC
AGGATAACAACAAAAATGATGAAGACGCTGCTCAGGAAAGCACCTCCAAAAGTGATCAAGCTGGTTTGGA
GTGTGAAAGGCAATGCCCTGAACGGTTGGAAGCTGAGCAGTCGGCTAATAGCAAGGAAGAGGCATTGGAA
GGTGGAGGGGAAGACAGACTGCCATCTCAGCCAGAGATTGGGCAGTTGAATAATTCAGGCACTCTGCCAG
TGCGTGAGACCTTCATGTTTTGTGCAAGCAGAAACACCGACCGGATCCACCTCTATACCAAGGATGGAAA
GCCAATGAACTGCAATTTTATTCCTTTGGATATAAAGTTAGACCTTTGGGAAGACTTACCAGCAACCTTT
CAACTGAAACAGAATCGCTCTCTGATTCTAAGGTTCGTCCGAGAGTGGAGTAGTCTGACTGCCATGAAGC
AGAGAGTTCTCAGGAAAAGTGGTCAGCTGTTCTGCAGCCCACTGCTGGCTTCGGAAGAGATCACAAAGCA
ACAAGCCAAGGAAAATAATACTAGAAGATACATCACTAAAGAAGATGTTGCCAAGGCTTCCATGAATAAG
GTGAAAAGTGATGGGGGCCACATCCGTCTCATCACCAAGGAATCCATGACCCAGGACTCTTCTCTAAAAA
AGATTGATAGCGCCTGTGTCCCATCTCTGAATCCCTGCCCAGCGGATCTCACTGTTGAGCCATCCCCATC
CAAAGGCTACATTCAGGCGGTGGATAAGGAAGGAAGGCCACTCTGCCTCCGCTGCCAGCATCCCACCTGC
CAGCCTGAGCAAACAGCCAAAGCCAGTGCCTGGGACTCACGGTTCTGCTCCCTGAAATGTCAGGAAGAAT
TCTGGATCCGATCCAATAACAGTTACCTGAGAGCCCAGGTGTTTGCAACAGAACATGGTGTGTGTCAGCA
CTGTGGTGTGGACGCACAGGAGCTCTTTCTGCGGATGAGAGATGCCCCTAAAAGTCACAGGAAGAGTCTC
CTCAATGCTGCCTGGACTGCAAAACTCCCACTGGAGCAGCTAAATGAGATGCTGAGAAACCCAGGAGAAG
GCCACTTCTGGCAGGTGGATCACATCAGGCCAGTGTATGAGGGAGGTGGACAGTGCTCCCTAGACAACCT
GCAGACCCTCTGCACAGTGTGCCACAAGGAGAGAACTGCCCAGCAAGCCAAGGAAAGAAGTCAGGTGAGA
CGACTCTCTCTGGCAACAAAGCACGGATCAGACATCACCCGGTTTCTGGTGAAGAAGTAA

Translation (1069 aa):
MPTAGSKKKAPTPQISCLTSESYTQLDFLPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAI
AIAYFYKEEWPLLIVVPSSLRYPWIEELEKWIPELEPEEINVVMNKTDIGRIPGSRVTVLGYGLLTTDAE
TLLDALNTQNFRVVIVDESHYMKSRTAARSKILLPMVQKARRAILLTGTPALGRPEELFMQIEALFPQKF
GTWIEYAKRYCNAHVRYFGKRRQWDCRGASNLSELHQLLNDIMIRRLKSEVLSQLPPKVRQRIPFDLPPA
AVKELNASFEEWQKLMRAPNSGAMETVMGLITRMFKQTAIAKAGAVKDYIKMLLQNDSLKFLVFAHHLSM
LQACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHVVFAELYWD
PGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNGRKEKLQATEDDKEKWGFL
QFAEAWTPSDSFEELKDSVFTHFEKEKQHDIRSFFLPKLKKRQLETTCDDPEAFKEKITVASDPRKMATS
DSTADKNGCEPEAKRLKSLSTEDHSSALEEGPSLQARATSMEVVHEVKPPLASPALPEKGWQCGFCTFLN
NPGLPYCEMCENPRSRAAGRNHLQDNNKNDEDAAQESTSKSDQAGLECERQCPERLEAEQSANSKEEALE
GGGEDRLPSQPEIGQLNNSGTLPVRETFMFCASRNTDRIHLYTKDGKPMNCNFIPLDIKLDLWEDLPATF
QLKQNRSLILRFVREWSSLTAMKQRVLRKSGQLFCSPLLASEEITKQQAKENNTRRYITKEDVAKASMNK
VKSDGGHIRLITKESMTQDSSLKKIDSACVPSLNPCPADLTVEPSPSKGYIQAVDKEGRPLCLRCQHPTC
QPEQTAKASAWDSRFCSLKCQEEFWIRSNNSYLRAQVFATEHGVCQHCGVDAQELFLRMRDAPKSHRKSL
LNAAWTAKLPLEQLNEMLRNPGEGHFWQVDHIRPVYEGGGQCSLDNLQTLCTVCHKERTAQQAKERSQVR
RLSLATKHGSDITRFLVKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH