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Report for CCDS18871.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
18871.1 |
Public |
Mus musculus |
4 |
Clcnka |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 18871.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000042617.13 |
ENSMUSP00000048520.7 |
Accepted |
alive |
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EBI |
ENSMUST00000105790.7 |
ENSMUSP00000101416.1 |
Accepted |
alive |
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NCBI |
NM_001146307.1 |
NP_001139779.1 |
Accepted |
alive |
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NCBI |
NM_024412.3 |
NP_077723.3 |
Accepted |
alive |
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Chromosomal Locations for CCDS 18871.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2064 nt): ATGGAAGAGCTGGTGGGGCTGCGTGAGGGCTCCTCCGGGAAGCCGGTGACTCTGCAAGAGCTATGGGGTC CGTGTCCACGCATCCGCCGAGGCATCAGAGGGGGCCTAGAGTGGCTGAAAGAGCGGCTGTTCCGTGCGCG TGAGGACTGGTACTTCCTGGTGGCTCTTGGGGTGCTCATGGCTCTGATCAGCTATGCCATGAACTTTGCT ATCGGGCGTGTGGTCAGAGCACACAAGTGGCTGTACAGAGAAGTTGGGGACGGCCACCTGCTCCGGTACC TCTCCTGGACCGTGTACCCCGTAGCTCTTCTGTCCTTCTCCTCCGGCTTCTCACAGAGCATTACGCCCTT CTCTGGAGGGTCTGGACTCCCAGAGCTGAAGACCATGCTGTCTGGAGTAGTCCTGGAGAACTACCTAGAC ATCAAGAACTTCGGGGCCAAGGTGGTGGGCCTCTCCTGCACCCTGGCCACAGGCAGCACCATCTTCCTAG GCAAAGTGGGCCCGTTCGTGCACCTGAGTGTGATGATTTCTGCTTATCTGGGCCGCGTGCGCGCCAAAGC CGTCGGGGATACTGAGAGCAAGGCCAAGGAAGTTGAAATGCTGTCGGCGGCAGCGGCGGTGGGCGTGGCC ACAGTCTTCGCCGCCCCCTTCAGTGGTGTCCTGTTCAGCATCGAGGTCATGTCCTCTCACTTCTCCGTCT GGAATTACTGGAGGGGCTTCTTCGCTGCCACCTGTGGGGCCTTCATGTTCCGTCTCCTGGCGGTCTTCAA CAGTGAACAGGAGACCATCACCTCCATCTACAAGACCAGATTCCGAGTGGATGTGCCCTTTGACCTGCCT GAAATCTTCTTCTTTGTGGCTCTGGGGTTCATCTGCGGGATCCTCAGTTGCGTTTACCTGTTCTGTCAGC GAAATTTTCTCCGCTTCATCAAGACCAATCGCTACACCTCCAAACTGCTGGCTACAAGCAAGCCTTCCTA CGCAGCTCTGGTCGCGCTGGTCCTGGCTTCAGTCACCTATCCTCCTGGTGTGGGCCGTTTCATGGCTTCC CGGCTGTCCATGGCGGAACACTTGCACTCTCTGTTTGACAACAACTCGTGGGCGTTGATGACTCGGAATG CGTCCCCACCCTGGCCTTCTGAGCCCGACCCCCAGAACCTGTGGTTTGAATGGTACCACCCACGGTTCAC CATCTTTGGGACGCTGGCCTTCTTCCTGATCATGAAGTTCTGGATGCTGATTCTGGCCACCACGATCCCC ATGCCTGCAGGCTACTTCATGCCTATATTCATCATCGGAGCTGCCATCGGGCGCCTCTTGGGAGAGGCCC TGTCTGTCGCCTTCCCAGAGGGCATTGTGGCTGGCGGAGAGGTCTATCCCATCATGCCTGGGGGCTATGC TCTGGCAGGTGCTGCTGCCTTCTCCGGAGCAGTGACCCACACCATCTCCACAGCGCTGCTGGCCTTTGAG CTGACTGGCCAGATCGTTCACGCACTGCCTGTGCTGATGGCTGTGCTGGCGGCCAATGTCATCTCCCAAA ACTTACAGCCCTCTTTCTACGATGGCACCATCATGGCCAAGAAACTGCCGTACCTGCCGTGGATCCGTGG CCGACAGATTGGCTCCTACCCTGTAACGGTGGAACATTTCATGAACTCTAACCTCACCACACTGGCCAAG GACATGCCCCTGGAGGAGGTGGTCAAGGTGGTGACCTCCACAGATGTGTCTCAGTATCCCTTGGTGGAGA CCAGAGAGTCTCAGACCCTGGTGGGCATTGTGGAAAGGACCCACTTGGTGCAAGCCCTTCAGACCCAGCC AGCTTCCTGGGCTCCAGGCCAAGAGCGATTTCTCCAGGACATCTTGGCTGGTGGCTGCCCCACACAGCCA GTGACCCTGCAGCTGTCCCCAGAGACCTCCCTATATCAGGCACACAGGCTCTTTGAGCTGCTGACCCTTC AGGCGCTGTTCGTGACGTCACGGGGCAGAGCTGTGGGCTCTGTGTCCTGGGTGGAGCTGAAGAAAGCCAT TTCCACCTTGATCAACCCACCAGCCCCCAAGTGA
Translation (687 aa): MEELVGLREGSSGKPVTLQELWGPCPRIRRGIRGGLEWLKERLFRAREDWYFLVALGVLMALISYAMNFA IGRVVRAHKWLYREVGDGHLLRYLSWTVYPVALLSFSSGFSQSITPFSGGSGLPELKTMLSGVVLENYLD IKNFGAKVVGLSCTLATGSTIFLGKVGPFVHLSVMISAYLGRVRAKAVGDTESKAKEVEMLSAAAAVGVA TVFAAPFSGVLFSIEVMSSHFSVWNYWRGFFAATCGAFMFRLLAVFNSEQETITSIYKTRFRVDVPFDLP EIFFFVALGFICGILSCVYLFCQRNFLRFIKTNRYTSKLLATSKPSYAALVALVLASVTYPPGVGRFMAS RLSMAEHLHSLFDNNSWALMTRNASPPWPSEPDPQNLWFEWYHPRFTIFGTLAFFLIMKFWMLILATTIP MPAGYFMPIFIIGAAIGRLLGEALSVAFPEGIVAGGEVYPIMPGGYALAGAAAFSGAVTHTISTALLAFE LTGQIVHALPVLMAVLAANVISQNLQPSFYDGTIMAKKLPYLPWIRGRQIGSYPVTVEHFMNSNLTTLAK DMPLEEVVKVVTSTDVSQYPLVETRESQTLVGIVERTHLVQALQTQPASWAPGQERFLQDILAGGCPTQP VTLQLSPETSLYQAHRLFELLTLQALFVTSRGRAVGSVSWVELKKAISTLINPPAPK
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