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Report for CCDS32677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32677.1 Public Homo sapiens 17 ZNF652 24 110 108 CCDS HistoryNCBI Gene:22834Re-query CCDS DB by CCDS ID:32677.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000362063.6 ENSP00000354686.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000362063.6Link to Ensembl Protein Viewer:ENSP00000354686.2Re-query CCDS DB by Nucleotide ID:ENST00000362063Re-query CCDS DB by Protein ID:ENSP00000354686
Original member Current member EBI ENST00000430262.3 ENSP00000416305.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000430262.3Link to Ensembl Protein Viewer:ENSP00000416305.2Re-query CCDS DB by Nucleotide ID:ENST00000430262Re-query CCDS DB by Protein ID:ENSP00000416305
Original member Current member NCBI NM_001145365.3 NP_001138837.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145365.3Link to Protein Sequence:NP_001138837.1Re-query CCDS DB by Nucleotide ID:NM_001145365Re-query CCDS DB by Protein ID:NP_001138837Link to BLAST:NP_001138837.1
Original member Current member NCBI NM_014897.2 NP_055712.1 Accepted alive Link to Nucleotide Sequence:NM_014897.2Link to Protein Sequence:NP_055712.1Re-query CCDS DB by Nucleotide ID:NM_014897Re-query CCDS DB by Protein ID:NP_055712Link to BLAST:NP_055712.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138837.1 606 Q9Y2D9 606 100% 0 0
NP_055712.1 606 Q9Y2D9 606 100% 0 0

Chromosomal Locations for CCDS 32677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 49298413 49298924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49311312 49311456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49311927 49312042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49312698 49312845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 49316826 49317725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGAGCCACACAGCCAGTTCTTGTCAGGAGCTGGTTGAAAACTGTGCTGTGCATGTAGCAGGAATGGCAC
AAGAAGATAGCCGTCGTGGTCAAGTGCCATCTTCCTTTTATCATGGTGCCAACCAAGAACTTGACCTGTC
CACCAAAGTGTACAAAAGGGAATCAGGAAGTCCTTATTCTGTGTTAGTGGACACCAAGATGAGCAAACCG
CATCTCCATGAAACAGAAGAACAGCCATATTTCAGGGAGACAAGAGCAGTGTCTGACGTGCATGCTGTTA
AGGAAGACCGGGAGAATTCTGATGACACAGAGGAGGAAGAGGAAGAAGTCTCTTACAAAAGGGAGCAGAT
CATAGTGGAGGTAAACCTTAATAATCAAACATTAAATGTATCTAAAGGGGAAAAGGGTGTCTCTTCTCAG
TCCAAAGAGACTCCTGTTCTTAAGACAAGCAGTGAGGAGGAAGAGGAAGAGAGTGAGGAAGAGGCCACAG
ATGACAGCAATGACTATGGAGAGAATGAAAAGCAGAAGAAAAAGGAGAAGATAGTAGAGAAAGTCAGCGT
TACACAAAGGAGAACCAGGAGAGCTGCCTCTGTTGCCGCAGCTACCACTTCCCCTACTCCCAGAACTACA
AGAGGTCGTAGGAAGAGTGTAGAGCCACCTAAGCGTAAGAAGCGGGCCACAAAGGAGCCCAAAGCACCAG
TCCAGAAAGCTAAGTGTGAAGAGAAAGAGACTCTGACCTGTGAGAAGTGCCCCAGGGTATTTAACACTCG
CTGGTACCTGGAGAAGCACATGAACGTTACTCATAGGCGCATGCAGATTTGTGATAAATGTGGCAAGAAG
TTTGTCCTGGAAAGTGAGCTGTCCCTTCACCAGCAAACAGACTGTGAAAAAAACATTCAGTGTGTTTCCT
GTAACAAATCGTTCAAGAAACTCTGGTCCCTTCATGAACATATCAAGATCGTCCATGGATATGCAGAAAA
GAAATTTTCCTGTGAAATTTGTGAGAAGAAATTCTATACCATGGCTCATGTGCGGAAACACATGGTTGCA
CACACAAAAGACATGCCATTTACATGCGAAACCTGTGGAAAATCATTCAAACGCAGTATGTCACTCAAGG
TGCACTCCTTGCAGCATTCTGGAGAGAAGCCCTTTAGATGCGAGAACTGTGACGAAAGGTTTCAGTACAA
GTACCAGCTACGCTCCCACATGAGCATTCATATTGGGCACAAACAGTTCATGTGCCAGTGGTGTGGCAAG
GATTTCAACATGAAGCAGTACTTCGACGAACACATGAAAACACACACTGGAGAGAAACCCTTTATCTGTG
AAATCTGTGGCAAAAGCTTCACCAGCCGCCCCAACATGAAGAGACACCGCAGAACTCACACAGGCGAGAA
GCCCTATCCATGTGATGTGTGTGGCCAGCGGTTCCGCTTCTCGAACATGCTTAAGGCCCACAAGGAGAAG
TGCTTTCGGGTGACCAGCCCCGTGAATGTGCCACCTGCTGTCCAGATCCCACTTACAACTTCCCCAGCCA
CCCCAGTTCCTTCTGTGGTGAACACAGCCACAACCCCAACCCCTCCAATCAATATGAATCCTGTAAGCAC
TCTTCCCCCTCGGCCCATCCCCCACCCCTTCTCACACCTGCACATCCACCCACACCCTCACCACCCACAC
CACCTTCCCATCCCTCCAGTCCCTCACCTCCCGCCACCTCCAGCTCTCTTTAAGAGTGAGCCTTTAAATC
ATAGAGGCCAGAGTGAGGACAACTTTCTGCGGCACCTGGCAGAGAAGAACAGTTCAGCACAGCATCATTA
A

Translation (606 aa):
MSHTASSCQELVENCAVHVAGMAQEDSRRGQVPSSFYHGANQELDLSTKVYKRESGSPYSVLVDTKMSKP
HLHETEEQPYFRETRAVSDVHAVKEDRENSDDTEEEEEEVSYKREQIIVEVNLNNQTLNVSKGEKGVSSQ
SKETPVLKTSSEEEEEESEEEATDDSNDYGENEKQKKKEKIVEKVSVTQRRTRRAASVAAATTSPTPRTT
RGRRKSVEPPKRKKRATKEPKAPVQKAKCEEKETLTCEKCPRVFNTRWYLEKHMNVTHRRMQICDKCGKK
FVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSLHEHIKIVHGYAEKKFSCEICEKKFYTMAHVRKHMVA
HTKDMPFTCETCGKSFKRSMSLKVHSLQHSGEKPFRCENCDERFQYKYQLRSHMSIHIGHKQFMCQWCGK
DFNMKQYFDEHMKTHTGEKPFICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHKEK
CFRVTSPVNVPPAVQIPLTTSPATPVPSVVNTATTPTPPINMNPVSTLPPRPIPHPFSHLHIHPHPHHPH
HLPIPPVPHLPPPPALFKSEPLNHRGQSEDNFLRHLAEKNSSAQHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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