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Report for CCDS21921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21921.1 Public Mus musculus 7 Cpxm2 23 108 98 CCDS HistoryNCBI Gene:55987Re-query CCDS DB by CCDS ID:21921.1Re-query CCDS DB by GeneID:55987See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21921.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033149.4 ENSMUSP00000033149.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033149.4Link to Ensembl Protein Viewer:ENSMUSP00000033149.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033149Re-query CCDS DB by Protein ID:ENSMUSP00000033149
Original member Current member NCBI NM_018867.5 NP_061355.3 Accepted alive Link to Nucleotide Sequence:NM_018867.5Link to Protein Sequence:NP_061355.3Re-query CCDS DB by Nucleotide ID:NM_018867Re-query CCDS DB by Protein ID:NP_061355Link to BLAST:NP_061355.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061355.3 764 Q9D2L5 764 99.8691% 0 1

Chromosomal Locations for CCDS 21921.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 132043893 132044146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132047715 132047814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132048989 132049128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132054731 132055028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132057634 132057813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132059734 132059930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132062067 132062190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132070817 132070905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132078773 132078923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132080037 132080121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132106283 132106422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132128352 132128461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132143668 132143766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 132154286 132154613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2295 nt):
ATGGCCCGTCTGGGGACCGCCTGCCCTGCGCTGGCGCTGGCCCTGGCACTTGTGGCGGTGGCCCTGGCTG
GAGTCAGAGCCCAGGGCGCAGCCTTCGAGGAGCCTGACTATTACAGCCAGGAGCTCTGGCGGCGCGGGCG
CTATTATGGGCATCCGGAGCCTGAGCCGGAGCCGGAGCTCTTCTCGCCTTCAATGCATGAAGACCTTAGG
GTGGAGGAGCAGGAACAGCAGGAGCCGCACCAGCAGGGCCACAGAACTCCCAAGAAGGCCATCAAGCCCA
AGAAGGCTCCCAAGAGGGAGAAGTTAGTTGCAGAGACGCCTCCACCAGGTAAAAATAGCAACAGAAAAGG
CAGAAGAAGCAAGAATCTTGAGAAAGCTGCCAGTGATGACCATGGTGTCCCTGTGGCTCATGAGGATGTC
AGAGAGAGTTGCCCACCTCTTGGTCTGGAAACATTAAAAATCACAGACTTCCAGCTGCATGCCTCCACAT
CGAAGCGTTATGGCCTGGGAGCCCACCGGGGGAGACTCAACATCCAGGCAGGCATTAATGAAAATGACTT
TTACGATGGGGCTTGGTGTGCTGGTAGGAACGACTTGCATCAGTGGATCGAAGTGGATGCCCGGCGCCTG
ACCAAGTTCACAGGGGTCATTACCCAAGGAAGGAACTCTCTCTGGCTGAGTGACTGGGTGACATCCTATA
AAGTCATGGTGAGCAATGACAGCCACACATGGGTTACTGTGAAGAATGGATCTGGCGACATGATATTTGA
AGGAAACAGTGAGAAGGAGATTCCTGTGCTCAATGAGCTGCCAGTCCCCATGGTGGCCCGCTACATTCGC
ATAAACCCTCAGTCCTGGTTTGATAACGGGAGCATCTGCATGAGGATGGAGATCTTGGGCTGCCCACTGC
CGGATCCTAATAACTATTATCACCGACGTAATGAGATGACCACCACGGATGACCTGGATTTTAAGCACCA
CAACTATAAGGAAATGCGCCAGTTGATGAAGGTTGTCAATGAAATGTGCCCCAATATTACCAGGATTTAC
AACATTGGCAAAAGCCACCAGGGCCTGAAATTGTATGCGGTAGAGATCTCTGACCATCCTGGGGAACATG
AAGTTGGTGAGCCCGAGTTCCACTACATCGCAGGGGCCCACGGCAATGAGGTTCTGGGACGAGAACTGCT
GCTGCTGCTGCTGCACTTCCTCTGCCAGGAATACTCGGCGCAGAACGCACGCATCGTCCGCTTGGTGGAG
GAGACTCGAATCCACATTCTACCCTCCCTCAATCCTGATGGCTATGAGAAGGCCTATGAAGGAGGTTCCG
AGTTGGGAGGCTGGTCCCTGGGACGTTGGACCCATGATGGCATCGATATCAACAACAACTTTCCGGATTT
AAACTCGCTGCTCTGGGAGGCAGAGGACCAGCAGAATGCCCCAAGGAAGGTCCCCAACCACTACATTGCC
ATCCCTGAGTGGTTTCTGTCTGAGAATGCCACAGTGGCCACAGAGACCAGAGCCGTCATCGCCTGGATGG
AGAAGATCCCGTTTGTGCTGGGAGGCAACCTACAGGGGGGTGAGCTGGTCGTGGCATACCCCTATGACAT
GGTGCGGTCCCTGTGGAAGACCCAGGAGCACACCCCAACACCTGATGATCATGTGTTCCGCTGGCTGGCG
TATTCCTACGCCTCCACTCACCGCCTCATGACAGATGCCAGGAGGCGAGTGTGCCACACGGAAGATTTTC
AGAAGGAGGAGGGCACCGTCAATGGGGCTTCCTGGCACACAGTGGCTGGAAGTCTAAACGATTTCAGCTA
CCTCCATACAAACTGCTTTGAGCTGTCCATCTACGTGGGCTGTGATAAATACCCACACGAGAGCGAGCTG
CCGGAGGAATGGGAGAATAACCGGGAGTCTCTGATTGTGTTCATGGAGCAGGTTCATCGAGGCATCAAAG
GCATAGTGAGAGATTTACAAGGGAAAGGGATTTCAAATGCTGTCATCTCTGTGGAAGGTGTTAACCATGA
CATCCGGACAGCCAGCGATGGGGATTACTGGCGTCTACTGAACCCTGGCGAATATGTGGTCACAGCCAAG
GCGGAAGGCTTTATCACTTCCACCAAGAACTGCATGGTTGGCTATGATATGGGAGCTACTCGGTGTGACT
TCACCCTCACAAAGACCAACCTGGCTAGGATAAGAGAAATTATGGAGACATTTGGGAAGCAGCCTGTCAG
CCTACCCTCCAGGCGCCTGAAGCTGCGGGGACGGAAAAGGCGGCAGCGTGGGTGA

Translation (764 aa):
MARLGTACPALALALALVAVALAGVRAQGAAFEEPDYYSQELWRRGRYYGHPEPEPEPELFSPSMHEDLR
VEEQEQQEPHQQGHRTPKKAIKPKKAPKREKLVAETPPPGKNSNRKGRRSKNLEKAASDDHGVPVAHEDV
RESCPPLGLETLKITDFQLHASTSKRYGLGAHRGRLNIQAGINENDFYDGAWCAGRNDLHQWIEVDARRL
TKFTGVITQGRNSLWLSDWVTSYKVMVSNDSHTWVTVKNGSGDMIFEGNSEKEIPVLNELPVPMVARYIR
INPQSWFDNGSICMRMEILGCPLPDPNNYYHRRNEMTTTDDLDFKHHNYKEMRQLMKVVNEMCPNITRIY
NIGKSHQGLKLYAVEISDHPGEHEVGEPEFHYIAGAHGNEVLGRELLLLLLHFLCQEYSAQNARIVRLVE
ETRIHILPSLNPDGYEKAYEGGSELGGWSLGRWTHDGIDINNNFPDLNSLLWEAEDQQNAPRKVPNHYIA
IPEWFLSENATVATETRAVIAWMEKIPFVLGGNLQGGELVVAYPYDMVRSLWKTQEHTPTPDDHVFRWLA
YSYASTHRLMTDARRRVCHTEDFQKEEGTVNGASWHTVAGSLNDFSYLHTNCFELSIYVGCDKYPHESEL
PEEWENNRESLIVFMEQVHRGIKGIVRDLQGKGISNAVISVEGVNHDIRTASDGDYWRLLNPGEYVVTAK
AEGFITSTKNCMVGYDMGATRCDFTLTKTNLARIREIMETFGKQPVSLPSRRLKLRGRKRRQRG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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