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Report for CCDS29636.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29636.1 Public Mus musculus 19 Keg1 23 108 98 CCDS HistoryNCBI Gene:64697Re-query CCDS DB by CCDS ID:29636.1Re-query CCDS DB by GeneID:64697See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29636.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025598.9 ENSMUSP00000025598.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025598.9Link to Ensembl Protein Viewer:ENSMUSP00000025598.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025598Re-query CCDS DB by Protein ID:ENSMUSP00000025598
Original member Current member NCBI NM_029550.4 NP_083826.1 Accepted alive Link to Nucleotide Sequence:NM_029550.4Link to Protein Sequence:NP_083826.1Re-query CCDS DB by Nucleotide ID:NM_029550Re-query CCDS DB by Protein ID:NP_083826Link to BLAST:NP_083826.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083826.1 295 Q9DCY0 295 100% 0 0

Chromosomal Locations for CCDS 29636.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12709609 12709686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12710982 12711089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12714507 12714633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12715898 12716069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12718780 12719182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (888 nt):
ATGTTCTGCTTACAGAGTTCCCAAGCACTGCAGGTTCTGGAGAATTCCCTAAGGAAGCACCTCCCTGAGT
CCTTAAAGGTTTATGGGACTGTCTTCCACATCAATCAGGGAAACCCATTCAAGCTCAAGACTTTGGTGGA
CAAATGGCCTGATTTTAATACTGTTGTTATTCGACCCCAGGAAGAGGACATGACAGATGACCTTGACCAC
TACAACAACACTTATCTAGTGTATTCAAAGGATCCCAAGCACTGTCAGGAATTCCTTGGCTCATCAGAAG
TTATTAACTGGAAACAACATTTGCAGATTCAAAGTTCACAGTCAGACCTGGGCAAAGTGATAGAAAGTCT
TGGAGCCACTAACTTGGGCAAGGTCAAGCATAAGCAGTGCTTTCTCTATATGGTATGCCAAACAGCAAAG
AAACTGGCTCCTTCCTTGATGGATGCAAAGAACTTAGTAGTCAGCCGTAACAAGCTCACGCCTCTTGACC
AGCAGTTATTCAAATTTGCCTCACTGGATGTTACACATGCTGCACTGGTGAATAGCCTCTGGCATTTTGG
TGGCAATGAGAAGAGCCAGAAGTTCATTGAACGCTGTATCTTTACCTTCCCCAGCTTCTGTATTATGGGG
CCTGAGGGGACCCCTGTGTCCTGGACCCTGATGGACCACACTGGAGAACTGAGAATGGGAGGCACCTTGC
CTAAGTACCGGCGCCAGAGTCTCATTTACCATGTTGCTTCCCAGCAGATTCAGACACTAGAAAAGCTTGG
CTTTCCCATGTATGCACATGTGGATAAGGCTAACTTCACTGTTCAGAGAATGGTTGGCTTGCTGGGGCAA
ATCCTCTTGCCTTGTACCTGGAACCAGTGGAACTGTGTACCGCTATAA

Translation (295 aa):
MFCLQSSQALQVLENSLRKHLPESLKVYGTVFHINQGNPFKLKTLVDKWPDFNTVVIRPQEEDMTDDLDH
YNNTYLVYSKDPKHCQEFLGSSEVINWKQHLQIQSSQSDLGKVIESLGATNLGKVKHKQCFLYMVCQTAK
KLAPSLMDAKNLVVSRNKLTPLDQQLFKFASLDVTHAALVNSLWHFGGNEKSQKFIERCIFTFPSFCIMG
PEGTPVSWTLMDHTGELRMGGTLPKYRRQSLIYHVASQQIQTLEKLGFPMYAHVDKANFTVQRMVGLLGQ
ILLPCTWNQWNCVPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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