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Report for CCDS6867.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6867.1 Public Homo sapiens 9 ZBTB43 24 110 108 CCDS HistoryNCBI Gene:23099Re-query CCDS DB by CCDS ID:6867.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6867.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373457.1 ENSP00000362556.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373457.1Link to Ensembl Protein Viewer:ENSP00000362556.1Re-query CCDS DB by Nucleotide ID:ENST00000373457Re-query CCDS DB by Protein ID:ENSP00000362556
Original member Current member EBI ENST00000373464.5 ENSP00000362563.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373464.5Link to Ensembl Protein Viewer:ENSP00000362563.4Re-query CCDS DB by Nucleotide ID:ENST00000373464Re-query CCDS DB by Protein ID:ENSP00000362563
Original member Current member EBI ENST00000449886.5 ENSP00000390344.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449886.5Link to Ensembl Protein Viewer:ENSP00000390344.1Re-query CCDS DB by Nucleotide ID:ENST00000449886Re-query CCDS DB by Protein ID:ENSP00000390344
Original member Current member NCBI NM_001135776.2 NP_001129248.1 Accepted alive Link to Nucleotide Sequence:NM_001135776.2Link to Protein Sequence:NP_001129248.1Re-query CCDS DB by Nucleotide ID:NM_001135776Re-query CCDS DB by Protein ID:NP_001129248Link to BLAST:NP_001129248.1
Original member Current member NCBI NM_014007.4 NP_054726.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014007.4Link to Protein Sequence:NP_054726.1Re-query CCDS DB by Nucleotide ID:NM_014007Re-query CCDS DB by Protein ID:NP_054726Link to BLAST:NP_054726.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129248.1 467 O43298 467 100% 0 0
NP_054726.1 467 O43298 467 100% 0 0

Chromosomal Locations for CCDS 6867.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 126832510 126833913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGAGCCTGGAACAAACTCTTTTCGGGTAGAATTTCCTGATTTTTCCAGCACCATTCTACAGAAACTGA
ACCAGCAGCGCCAGCAAGGACAATTATGTGACGTCTCCATTGTTGTCCAAGGCCACATTTTCCGGGCACA
CAAAGCCGTTCTTGCTGCCAGTTCACCCTACTTTTGTGACCAGGTACTCCTGAAAAACAGCAGGAGAATT
GTTTTGCCTGATGTGATGAACCCAAGAGTGTTTGAGAACATTCTCCTATCTAGTTATACAGGACGTCTAG
TAATGCCCGCTCCAGAAATTGTTAGTTACTTGACAGCGGCAAGCTTCCTCCAGATGTGGCATGTGGTAGA
CAAATGCACTGAAGTTTTAGAGGGAAACCCTACAGTCCTTTGTCAGAAGCTAAATCATGGCAGTGACCAC
CAGTCACCAAGCAGCAGTAGTTATAATGGCCTGGTAGAGAGCTTTGAGCTGGGCTCTGGGGGTCATACTG
ATTTTCCCAAAGCCCAAGAACTGAGAGATGGTGAAAATGAAGAGGAGAGCACCAAAGACGAGCTGTCATC
CCAGCTCACCGAGCACGAATACCTGCCCAGCAACTCGTCCACAGAGCATGACCGCCTGAGCACGGAAATG
GCAAGCCAGGATGGGGAGGAGGGCGCCAGCGACAGCGCCGAGTTCCACTACACCCGGCCCATGTACAGCA
AGCCCAGCATCATGGCTCACAAACGCTGGATCCACGTGAAGCCCGAGCGCTTAGAACAGGCTTGCGAGGG
CATGGATGTGCACGCGACCTACGACGAGCACCAGGTCACAGAGTCCATCAACACCGTGCAGACAGAGCAC
ACGGTGCAGCCTTCGGGAGTGGAGGAGGACTTCCACATCGGGGAGAAGAAAGTGGAAGCTGAGTTTGATG
AACAGGCTGATGAAAGCAATTATGATGAGCAGGTGGATTTCTATGGCTCTTCCATGGAAGAGTTTTCCGG
AGAGAGGTCAGATGGGAATCTAATTGGGCACAGACAGGAGGCTGCCCTCGCAGCAGGTTACAGTGAGAAT
ATTGAAATGGTAACAGGGATTAAAGAAGAAGCTTCCCACTTAGGATTCTCAGCCACTGACAAGCTGTATC
CTTGTCAGTGTGGGAAAAGTTTCACTCACAAGAGTCAGAGAGATCGGCACATGAGCATGCACCTCGGTCT
TCGGCCTTACGGCTGTGGGGTCTGCGGTAAGAAATTCAAAATGAAGCACCATCTCGTGGGCCACATGAAA
ATTCACACAGGCATAAAGCCGTATGAGTGTAATATCTGTGCAAAGAGGTTTATGTGGAGGGACAGTTTCC
ACCGGCATGTGACTTCTTGTACTAAGTCCTACGAAGCTGCAAAGGCTGAGCAGAATACAACTGAGGCTAA
CTAA

Translation (467 aa):
MEPGTNSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHIFRAHKAVLAASSPYFCDQVLLKNSRRI
VLPDVMNPRVFENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKLNHGSDH
QSPSSSSYNGLVESFELGSGGHTDFPKAQELRDGENEEESTKDELSSQLTEHEYLPSNSSTEHDRLSTEM
ASQDGEEGASDSAEFHYTRPMYSKPSIMAHKRWIHVKPERLEQACEGMDVHATYDEHQVTESINTVQTEH
TVQPSGVEEDFHIGEKKVEAEFDEQADESNYDEQVDFYGSSMEEFSGERSDGNLIGHRQEAALAAGYSEN
IEMVTGIKEEASHLGFSATDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK
IHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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