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Report for CCDS19142.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19142.1 Public Mus musculus 5 Insig1 23 108 98 CCDS HistoryNCBI Gene:231070Re-query CCDS DB by CCDS ID:19142.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19142.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059155.10 ENSMUSP00000061877.10 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059155.10Link to Ensembl Protein Viewer:ENSMUSP00000061877.10Re-query CCDS DB by Nucleotide ID:ENSMUST00000059155Re-query CCDS DB by Protein ID:ENSMUSP00000061877
Original member Current member NCBI NM_153526.5 NP_705746.1 Accepted alive Link to Nucleotide Sequence:NM_153526.5Link to Protein Sequence:NP_705746.1Re-query CCDS DB by Nucleotide ID:NM_153526Re-query CCDS DB by Protein ID:NP_705746Link to BLAST:NP_705746.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705746.1 259 Q8BGI3 259 100% 0 0

Chromosomal Locations for CCDS 19142.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 28071438 28071795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 28073547 28073671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 28074482 28074648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 28075062 28075161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 28076791 28076820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (780 nt):
ATGCCCAGGCTGCACGACCACGTCTGGAACTATCCAAGCGCGGGCGCTGCGAGGCCGTACAGCCTCCCGC
GAGGCATGATTGCGGCGGCCGCTTGTCCGCAGGGCCCCGGAGTCCCCGAACCCGAGCACGCGCCCCGGGG
CCAGCGAGCGGGAACCACAGGATGCAGCGCGCGGCCGGGCAGCTGGCACCACGACTTGGTGCAGCGGAGC
CTAGTGCTCTTCTCATTTGGCGTGGTCCTGGCCCTGGTGCTCAACCTGCTGCAGATCCAGCGGAATGTCA
CGCTCTTCCCCGACGAGGTGATAGCCACCATCTTCTCCTCCGCCTGGTGGGTGCCCCCGTGCTGTGGCAC
GGCAGCGGCTGTTGTCGGTTTACTGTATCCCTGTATTGACAGTCACCTGGGAGAACCACACAAGTTCAAG
AGAGAATGGGCCAGCGTTATGCGCTGTATTGCCGTGTTCGTTGGCATCAACCACGCCAGTGCCAAATTAG
ATTTTGCCAATAATGTCCAGCTGTCCTTGACTTTAGCAGCCCTCTCTTTGGGTTTGTGGTGGACATTTGA
TCGTTCCCGAAGCGGCCTTGGGCTTGGGATTACCATCGCCTTCCTAGCTACGCTGATCACTCAGTTTCTT
GTGTATAATGGTGTCTACCAGTACACGTCCCCTGATTTCCTCTATATCCGTTCTTGGCTCCCCTGTATAT
TTTTCTCAGGAGGTGTCACAGTGGGAAACATAGGACGACAGTTAGCTATGGGTGTTCCGGAAAAGCCTCA
CAGTGACTGA

Translation (259 aa):
MPRLHDHVWNYPSAGAARPYSLPRGMIAAAACPQGPGVPEPEHAPRGQRAGTTGCSARPGSWHHDLVQRS
LVLFSFGVVLALVLNLLQIQRNVTLFPDEVIATIFSSAWWVPPCCGTAAAVVGLLYPCIDSHLGEPHKFK
REWASVMRCIAVFVGINHASAKLDFANNVQLSLTLAALSLGLWWTFDRSRSGLGLGITIAFLATLITQFL
VYNGVYQYTSPDFLYIRSWLPCIFFSGGVTVGNIGRQLAMGVPEKPHSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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