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Report for CCDS32306.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32306.1 Public Homo sapiens 15 MINAR1 24 110 108 CCDS HistoryNCBI Gene:23251Re-query CCDS DB by CCDS ID:32306.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32306.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000305428.8 ENSP00000307461.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000305428.8Link to Ensembl Protein Viewer:ENSP00000307461.3Re-query CCDS DB by Nucleotide ID:ENST00000305428Re-query CCDS DB by Protein ID:ENSP00000307461
Original member Current member NCBI NM_015206.3 NP_056021.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015206.3Link to Protein Sequence:NP_056021.1Re-query CCDS DB by Nucleotide ID:NM_015206Re-query CCDS DB by Protein ID:NP_056021Link to BLAST:NP_056021.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056021.1 916 Q9UPX6 916 100% 0 0

Chromosomal Locations for CCDS 32306.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 79456148 79458445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79463067 79463321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 79468187 79468384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2751 nt):
ATGGAGACCAGTCAGGAAACTTCCCTCTTCTTGGTGAAGATCTTGGAGGAACTGGACAGCAAGCAAAATA
CCGTTTCTTATCAGGACCTGTGCAAATCTCTCTGTGCCCGGTTCGACCTGTCGCAGCTTGCCAAACTGAG
AAGTGTGCTCTTCTACACAGCTTGTCTCGATCCCAATTTTCCAGCCACGCTATTCAAAGACAAGATGAAA
TGCACTGTGAATAACCAGCAATCAAAGAAAATCATGGTGGCAGCAGATATTGTGACGATATTCAACCTGA
TCCAAATGAATGGCGGGGCTGCCAAGGAGAAGCTGCCCACGGGCCGCCAGAAGGTACGCAAGAAGGAGGC
ATCCTTTGAATCATGTAGGTCGGACACAGAGATCTGCAATGCAGCTGAGTGTGAGCCCCTGAACTGTGAG
CTGAGTGAGAGGTCTTTCAGCCGGGGCTACCCCATCAGGCAGTCGTCCAAGTGCCGGAAGATGGACTGCA
AGGACTGCCCACAGTTTGTCCCTGCCTCTGAGCCTAACTTCCTGTTGGGAGTTAGCAAAGAGGTGAAAAA
CCGCGCCGCTTCCCTGGACAGGTTGCAGGCCCTGGCTCCGTACTCTGTGACCAGCCCTCAGCCCTGTGAG
ATGCAGAGGACCTACTTCCCCATGAACATCGAAAACGAGTCCATTTCAGACCAGGACTCCCTGCCCATCA
ATCAGAGCATCAAGGAGACCTTCATTTCCAATGAGGAGCCATTTGTGGTCCAGTCCTGTGTCCAGAAAAG
GAATATCTTCAAAGAGGATTTTCACAATTTGATGGCAGTGTCCCCCAGTTTGGTTGGCCCCATCAGCAAA
GCAGAGAATGAGCACAGGGAACCCCAGAGTCGAAAGGAACCCCACAAGCCACCCTTCTTCAACCACAGCT
TTGAAATGCCCTATAACAGCCAGTACCTGAATCCAGTGTATTCCCCGGTTCCTGACAAAAGGCGAGCAAA
GCACGAAAGCTTAGATGACCTTCAAGCCTCTACATATTTTGGGCCCACTCCCGTGATGGGAACCCAAGAA
GCCAGGCGCTGTCTAGGGAAGCCCAACAAGCAGACTCCCTGGCCAGCCAAAAGCTGGAGCCTAAACACAG
AGGAAGTTCCTGACTTTGAACGGTCCTTTTTCAATAGAAATCCCTCCGAGGAGAAGCTACACTATCCAAA
TGCCAGTAGCCAGACCCCCAATTTCCCAGCCCCAGAAAGGCGCCCAACTTACCTTGTGCCAAAGGATCAA
CAGCCAATTCTCCCCATTGCTTATGCGGCAAAACAAAATGGGCTCAAATCTAAAGAGATCTCATCCCCTG
TTGACCTGGAGAAGCATGAACCAGTCAAAAAGTTTAAAGACAAGAGCATTAACTGCACCAGTGGGCAGCT
CAGCTCAGACACCAGTAGCGTGGGCACCCAGACTGAGCACGTGCTGGAGCCCAAGAAATGCAGAGACCTG
TGCACCTCTGGTCAGGGCAAGTACAGTGACAGGCACACCATGAAGCACTCAGACGATGACTCAGAAATTG
TCAGCGACGACATCAGTGACATTTTCCGATTTCTTGATGACATGAGCATCAGTGGCTCCACGGGAGTGAT
ACAGTCGTCCTGCTACAACAGCACAGGATCCTTGTCTCAGCTCCATAAGTCAGACTGCGACAGTTCCCCT
GAGCACAACTTAACCAAAATTGCCAATGGGGTCCCCAACAGCAAGGGAGACAAGGGCAACCGGCCTGAAA
ACACCCACCACTCGGAAGAAGAGCTGAAGACCAGTGTGTGCAAACTGGTGCTCAGGATTGGCGAAATTGA
ACGGAAGCTGGAATCCCTGTCGGGTGTCCGTGATGAAATCTCCCAGGTCTTGGGCAAACTAAATAAATTG
GACCAGAAAATGCAACAGCCTGAGAAGGTGAGTGTGCAGATAGATCTGAACTCCTTGACAAGCGAGGGTC
CGTCTGATGACAGTGCCTCTCCCCGGATGTTCCACGCACACAGTGGCTCCCACGGACCCAAACTAGAGAA
CAACCCTGACTGGTGCTGCTCTGATGCTAGCGGGAGCAACAGTGAAAGCCTGCGGGTCAAGGCCTTAAAA
AAAAGCCTCTTCACCAGGCCATCCTCTAGGTCCCTAACAGAGGAGAACAGTGCCACAGAGTCCAAAATTG
CCAGCATCTCCAACTCGCCCAGAGACTGGCGCACCATCACTTATACCAACCGTGTGGGCCTCAATGAGGA
GGAGATAAAAGACACAGGCCCAGGAGATAATAAAGACTGGCATCGGAAATCTAAAGAGGCAGACAGGCAG
TACGACATTCCCCCACAGCACCGACTGCCCAAGCAGCCCAAAGATGGCTTCCTGGTGGAGCAGGTGTTCA
GCCCTCACCCCTACCCTGCCTCCCTCAAGGCCCACATGAAGAGCAACCCCCTGTACACAGACATGCGGCT
GACCGAGTTGGCCGAGGTGAAGCGGGGCCAACCTTCTTGGACCATTGAGGAGTATGCACGGAATGCGGGC
GACAAGGGCAAGCTGACAGCCCTGGACCTGCAGACGCAAGAATCTTTAAACCCAAATAATTTAGAGTACT
GGATGGAAGACATTTATACTCCAGGATACGATTCATTACTAAAACGTAAAGAAGCCGAATTCAGACGAGC
CAAGGTCTGCAAGATAGCTGCTCTGATCGCTGCTGCGGCATGCACCGTCATCCTCGTTATTGTCGTGCCC
ATCTGCACAATGAAATCATGA

Translation (916 aa):
METSQETSLFLVKILEELDSKQNTVSYQDLCKSLCARFDLSQLAKLRSVLFYTACLDPNFPATLFKDKMK
CTVNNQQSKKIMVAADIVTIFNLIQMNGGAAKEKLPTGRQKVRKKEASFESCRSDTEICNAAECEPLNCE
LSERSFSRGYPIRQSSKCRKMDCKDCPQFVPASEPNFLLGVSKEVKNRAASLDRLQALAPYSVTSPQPCE
MQRTYFPMNIENESISDQDSLPINQSIKETFISNEEPFVVQSCVQKRNIFKEDFHNLMAVSPSLVGPISK
AENEHREPQSRKEPHKPPFFNHSFEMPYNSQYLNPVYSPVPDKRRAKHESLDDLQASTYFGPTPVMGTQE
ARRCLGKPNKQTPWPAKSWSLNTEEVPDFERSFFNRNPSEEKLHYPNASSQTPNFPAPERRPTYLVPKDQ
QPILPIAYAAKQNGLKSKEISSPVDLEKHEPVKKFKDKSINCTSGQLSSDTSSVGTQTEHVLEPKKCRDL
CTSGQGKYSDRHTMKHSDDDSEIVSDDISDIFRFLDDMSISGSTGVIQSSCYNSTGSLSQLHKSDCDSSP
EHNLTKIANGVPNSKGDKGNRPENTHHSEEELKTSVCKLVLRIGEIERKLESLSGVRDEISQVLGKLNKL
DQKMQQPEKVSVQIDLNSLTSEGPSDDSASPRMFHAHSGSHGPKLENNPDWCCSDASGSNSESLRVKALK
KSLFTRPSSRSLTEENSATESKIASISNSPRDWRTITYTNRVGLNEEEIKDTGPGDNKDWHRKSKEADRQ
YDIPPQHRLPKQPKDGFLVEQVFSPHPYPASLKAHMKSNPLYTDMRLTELAEVKRGQPSWTIEEYARNAG
DKGKLTALDLQTQESLNPNNLEYWMEDIYTPGYDSLLKRKEAEFRRAKVCKIAALIAAAACTVILVIVVP
ICTMKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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