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Report for CCDS20906.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20906.1 Public Mus musculus 7 Ppp1r37 23 108 98 CCDS HistoryNCBI Gene:232947Re-query CCDS DB by CCDS ID:20906.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20906.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058444.9 ENSMUSP00000060233.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058444.9Link to Ensembl Protein Viewer:ENSMUSP00000060233.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000058444Re-query CCDS DB by Protein ID:ENSMUSP00000060233
Original member Current member NCBI NM_199149.3 NP_954600.1 Accepted alive Link to Nucleotide Sequence:NM_199149.3Link to Protein Sequence:NP_954600.1Re-query CCDS DB by Nucleotide ID:NM_199149Re-query CCDS DB by Protein ID:NP_954600Link to BLAST:NP_954600.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954600.1 712 Q8BKR5 712 100% 0 0

Chromosomal Locations for CCDS 20906.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19531511 19531593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19531784 19532525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19532647 19532813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19532918 19533059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19533964 19534076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19534371 19534526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19534607 19534757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19534989 19535108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19535491 19535591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19535709 19535754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19537370 19537467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19561811 19562030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2139 nt):
ATGGAGATCCCGCCGCAGGAGGCTCCGCCCGGGCCGGGCGCGGACGCCGACGCGGACGCGGAGGCCGAGA
CCGAGGAGGCCTCCGCCGAAGCTGAGTCTCCTACCGGGACCTCGCCCCCGGCCGATGGCCGCCTTAAGGC
TGCTGCCAAGCGTGTCACGTTCCCATCTGACGAGGACATCGTGTCTGGAGCGGTGGAGCCCAAAGACCCC
TGGAGACACGCCCAGAATGTGACGGTGGACGAGGTGATCAGTGCCTACAGACAGGCCTGCCAGAAGCTGA
ACTGCCGACAAATCCCCAAGCTCCTCAGGCAGCTGCAGGAGTTCACGGATCTTGAGCAACGCATCAACTG
CCTGGACCTGAAAGGGGAGAAGCTTGATTATAAGACCTGTGAGGCTCTGGAGGAGGTCTTTAAGAGGCTG
CAGTTCAAGGTTGTGGACCTGGAGCAAACCAACTTAGATGAGGATGGTGCCTCAGCCCTCTTTGACATGA
TTGAGTACTACGAGTCGGCCACCCACCTCAACATCTCTTTCAACAAGCACATCGGCACTCGGGGCTGGCA
GGCTGCTGCCCACATGATGCGCAAGACAAGTTGCCTACAGTACCTAGATGCCCGCAACACACCCCTGCTG
GACCACTCGGCACCCTTTGTGGCTCGCGCCCTGCGCATCCGCAGCAGCCTGGCAGTGCTGCACCTAGAAA
ATGCCAGCCTGTCCGGGCGGCCCCTCATGCTGCTGGCCACAGCCCTGAAGATGAACATGAACCTCCGAGA
ACTGTACTTGGCAGACAACAAGCTCAACGGTCTGCAGGACTCTGCCCAGCTGGGCAACTTGCTCAAATTC
AACTGCTCCCTGCAAATTCTGGACCTGCGGAACAACCACGTGCTGGACTCAGGTCTGGCCTACATCTGCG
AGGGTCTCAAGGAGCAGAGGAAAGGGCTGGTGACCCTGGTGCTGTGGAACAACCAGCTCACACACACGGG
CATGGCCTTCTTGGGCATGGCACTGCCACACACACAGAGTCTGGAGACACTGAACCTGGGCCACAACCCC
ATTGGGAACGAGGGTGTACGAAACCTCAAGAATGGGCTCATCAGCAACCGCAGTGTGCTGCGCCTCGGCC
TCGCCTCAACCAAGCTCACGTGCGAGGGCGCGGTGGCCGTGGCAGAGTTCATCGCCGAGAGCCCCCGCCT
CCTGAGACTGGACCTCCGGGAAAACGAGATCAAGACAGGCGGGCTCATGGCGCTGTCCTTGGCCCTCAAG
GTGAACCACTCCCTGCTTCGATTGGACCTGGACCGAGAGCCCAAGAAAGAGCCGGTGAAGAGCTTCATCG
AGACGCAGAAGGCACTACTGGCTGAGATCCAGAACGGCTGCAAGCGCAACTTTGTGCTGGTTCGAGAGCG
TGAGGAGAAGCAGCAGCTGCAGCTGTCAGCCTCCATGCCTGAGATCACCATCACTGCACCGCAGCCCCTG
GAAGAGTCTGGGGAGCTGCCAGCCGTCGGGTCTCAGAATGGGGCCCCTCGCCCTGGACCTGGCCCTGACT
CAGACTCAGACTCAGACTCTGACAGGGAGGAGCAGGAGGAAGAGGAGGAGGACCAACGAAACCAGCAGAG
GGATGAGGGGGGCAACGACCAGAGCTCCTTGGCCTCCTGCCCTGCCCTCATACCTTCCACAGACTCCCTA
GGCCCTGGTGACAAGAGCCCCCCAAGCAGCCCCTCCTCTCCCACTGAGCAGCGTATTTCTGTCTCCAGCC
CAGGCCGAGGCCACAAGGTATTTGTGGTGACCCGGGTGGAGAGTCCACCTGAGAGGCCAGAGCCCCCTGT
TCCTCCCACCTTTGTCTCCTCTCCTCCACCCTCTCCTCCCTCCCCGCCTGCCTCTCCACCATCTCAGACC
ATGGACACCCAGGACCCAGAGTCATCTGAGGCTCAGCCCCAGCTGGAGCCATCTCAGGCAGGGCAGCCAC
TGCCCAATGGCCTGAAGCCTGAGTTTGCCCTCGCACTTCCCCCAGAGCCTCCCCCAGGGCTGGAGGCTAA
GGGAGGCAGCTGCAGCCTGGAGCACGCACTGCACCGCTCCCAGGGTGTTAGCAAGCTGGAGGAACTGCTT
CTAGAGGCCAGTCAGGAGGCCCCGCGGGACACACTGTGA

Translation (712 aa):
MEIPPQEAPPGPGADADADAEAETEEASAEAESPTGTSPPADGRLKAAAKRVTFPSDEDIVSGAVEPKDP
WRHAQNVTVDEVISAYRQACQKLNCRQIPKLLRQLQEFTDLEQRINCLDLKGEKLDYKTCEALEEVFKRL
QFKVVDLEQTNLDEDGASALFDMIEYYESATHLNISFNKHIGTRGWQAAAHMMRKTSCLQYLDARNTPLL
DHSAPFVARALRIRSSLAVLHLENASLSGRPLMLLATALKMNMNLRELYLADNKLNGLQDSAQLGNLLKF
NCSLQILDLRNNHVLDSGLAYICEGLKEQRKGLVTLVLWNNQLTHTGMAFLGMALPHTQSLETLNLGHNP
IGNEGVRNLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRLLRLDLRENEIKTGGLMALSLALK
VNHSLLRLDLDREPKKEPVKSFIETQKALLAEIQNGCKRNFVLVREREEKQQLQLSASMPEITITAPQPL
EESGELPAVGSQNGAPRPGPGPDSDSDSDSDREEQEEEEEDQRNQQRDEGGNDQSSLASCPALIPSTDSL
GPGDKSPPSSPSSPTEQRISVSSPGRGHKVFVVTRVESPPERPEPPVPPTFVSSPPPSPPSPPASPPSQT
MDTQDPESSEAQPQLEPSQAGQPLPNGLKPEFALALPPEPPPGLEAKGGSCSLEHALHRSQGVSKLEELL
LEASQEAPRDTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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