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Report for CCDS80856.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80856.1 Public Mus musculus 8 Zfp958 23 108 98 CCDS HistoryNCBI Gene:233987Re-query CCDS DB by CCDS ID:80856.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80856.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202692.4 ENSMUSP00000143842.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202692.4Link to Ensembl Protein Viewer:ENSMUSP00000143842.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202692Re-query CCDS DB by Protein ID:ENSMUSP00000143842
Original member Current member NCBI NM_145591.5 NP_663566.1 Accepted alive Link to Nucleotide Sequence:NM_145591.5Link to Protein Sequence:NP_663566.1Re-query CCDS DB by Nucleotide ID:NM_145591Re-query CCDS DB by Protein ID:NP_663566Link to BLAST:NP_663566.1

Chromosomal Locations for CCDS 80856.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 4613276 4613278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4625840 4625966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4626164 4626224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 4628168 4629380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGATGCAGTGACCTTTGATGATGTGCATGTGGACTTCACTTCGGAAGAGTGGGCTTTGCTGGATCCTT
CCCAGAAGAGTCTTTACAAAGATGTGATGCTGGAGACCTACTGGAACCTCACTGCTATAGGTTACAATTT
GGAAGACCAAACTATTGAAGAACATTTTCAAAGTTCTAGAAGACATGGAAGACCTGAAAGAAGTCATACT
GGAGAGAAACCCTATGAAGAAATTAAGTATGGTGAAGCTTTTGCACATCACGGTAGTCTCCAAATACATA
AAAGAATTCATACTGGAAAGAAATTCTATGAATGTAATCCATGTGGTAAAGCCTTTGCATATCACTGCCA
TCTTCGAATACATAAAAGGATACATACTGCAGAGAAACTCTACAAATGTATTCAATGTGGTAAAGCTTTT
TCAGAACATAATACTCTTCAAAAACATAAAAGAACTCATTCAGAAGAGAAACCCTATGAATGTAATCAAT
GTGGTAAAGCCTTTGCACATCATAATATTCTTCGAAATCATGAAAGAACTCATATTGGAGAGAAACCTTA
CCAATGTAATGAATGTGATAAGGCCTTTTCACAACACTATTATTTACGAATACATAAAAGAATACACACT
GGAGAGAAACCTTATGAATGTAATCAGTGTGATAAAGCCTTTGCATGTCTCAGCTATCTTCGAGTGCATG
GAAGAACACATACTGGAGAGAAACCTTACAAATGTAATCAATGTGGTAAAGTCTTTGCAAGTCATAGTAA
TCTTAAACGACATAAAAGAACACACACTGGAGAGAAACCTTATGAATGTAATCAGTGTGGTAAAGCCTTT
TCAGACCACCATACTCTCCGAATACATGAAAGAGCACATACGGGAGAGAAACCCTTTGAATGCAACCAGT
GTGGTAAAACCTTTAAACTACACAGTCAACTCCGAATACATAAAAGAACGCACACCGGAGAGAAACCTCA
TGAATGTAATCAATGTGGTAAAACCTTTGCATGTCCCAGTAGTTTCCAAAAACATAAAAGAATACATACT
GGAGAGAAACCCTATGAATGCAATCAGTGTCTTAAAGCCTTTGCATATCATAGTAGACTCCGAAAACATG
AAAGAACACATACTGGAGAGAAACCCTTCAGATGTAATCAATGTGGCAAAATCTTTTCACAGTCCAATAG
TCTCCAAGTACATAAAAGAACACATACTGGAGAGAAACCCTATGAATGTGATAGATGTGGTAAAGCCTTT
CCATATGATAGTAGTCTCCGAGTGCATAAAAGAACACACACTGGAGTGAAGCCTTATGAATGTAACCAGT
GTGGCAAAGCCTTTGGATATAACAGTCATCTTCAGAGGCATGAAAGAACACATACTGGAGAGAAACCTTA
TTAA

Translation (467 aa):
MDAVTFDDVHVDFTSEEWALLDPSQKSLYKDVMLETYWNLTAIGYNLEDQTIEEHFQSSRRHGRPERSHT
GEKPYEEIKYGEAFAHHGSLQIHKRIHTGKKFYECNPCGKAFAYHCHLRIHKRIHTAEKLYKCIQCGKAF
SEHNTLQKHKRTHSEEKPYECNQCGKAFAHHNILRNHERTHIGEKPYQCNECDKAFSQHYYLRIHKRIHT
GEKPYECNQCDKAFACLSYLRVHGRTHTGEKPYKCNQCGKVFASHSNLKRHKRTHTGEKPYECNQCGKAF
SDHHTLRIHERAHTGEKPFECNQCGKTFKLHSQLRIHKRTHTGEKPHECNQCGKTFACPSSFQKHKRIHT
GEKPYECNQCLKAFAYHSRLRKHERTHTGEKPFRCNQCGKIFSQSNSLQVHKRTHTGEKPYECDRCGKAF
PYDSSLRVHKRTHTGVKPYECNQCGKAFGYNSHLQRHERTHTGEKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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