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Report for CCDS9877.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9877.1 Public Homo sapiens 14 FLRT2 24 110 108 CCDS HistoryNCBI Gene:23768Re-query CCDS DB by CCDS ID:9877.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9877.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330753.6 ENSP00000332879.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330753.6Link to Ensembl Protein Viewer:ENSP00000332879.4Re-query CCDS DB by Nucleotide ID:ENST00000330753Re-query CCDS DB by Protein ID:ENSP00000332879
Original member Current member EBI ENST00000554746.1 ENSP00000451050.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554746.1Link to Ensembl Protein Viewer:ENSP00000451050.1Re-query CCDS DB by Nucleotide ID:ENST00000554746Re-query CCDS DB by Protein ID:ENSP00000451050
Original member Current member EBI ENST00000682132.1 ENSP00000507088.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682132.1Link to Ensembl Protein Viewer:ENSP00000507088.1Re-query CCDS DB by Nucleotide ID:ENST00000682132Re-query CCDS DB by Protein ID:ENSP00000507088
Original member Current member EBI ENST00000683129.1 ENSP00000507815.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683129.1Link to Ensembl Protein Viewer:ENSP00000507815.1Re-query CCDS DB by Nucleotide ID:ENST00000683129Re-query CCDS DB by Protein ID:ENSP00000507815
Original member Current member NCBI NM_001346143.2 NP_001333072.1 Accepted alive Link to Nucleotide Sequence:NM_001346143.2Link to Protein Sequence:NP_001333072.1Re-query CCDS DB by Nucleotide ID:NM_001346143Re-query CCDS DB by Protein ID:NP_001333072Link to BLAST:NP_001333072.1
Original member Current member NCBI NM_001346144.2 NP_001333073.1 Accepted alive Link to Nucleotide Sequence:NM_001346144.2Link to Protein Sequence:NP_001333073.1Re-query CCDS DB by Nucleotide ID:NM_001346144Re-query CCDS DB by Protein ID:NP_001333073Link to BLAST:NP_001333073.1
Original member Current member NCBI NM_001346145.2 NP_001333074.1 Accepted alive Link to Nucleotide Sequence:NM_001346145.2Link to Protein Sequence:NP_001333074.1Re-query CCDS DB by Nucleotide ID:NM_001346145Re-query CCDS DB by Protein ID:NP_001333074Link to BLAST:NP_001333074.1
Original member Current member NCBI NM_001346146.2 NP_001333075.1 Accepted alive Link to Nucleotide Sequence:NM_001346146.2Link to Protein Sequence:NP_001333075.1Re-query CCDS DB by Nucleotide ID:NM_001346146Re-query CCDS DB by Protein ID:NP_001333075Link to BLAST:NP_001333075.1
Original member Current member NCBI NM_013231.6 NP_037363.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013231.6Link to Protein Sequence:NP_037363.1Re-query CCDS DB by Nucleotide ID:NM_013231Re-query CCDS DB by Protein ID:NP_037363Link to BLAST:NP_037363.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001333072.1 660 O43155 660 100% 0 0
NP_001333073.1 660 O43155 660 100% 0 0
NP_001333074.1 660 O43155 660 100% 0 0
NP_001333075.1 660 O43155 660 100% 0 0
NP_037363.1 660 O43155 660 100% 0 0

Chromosomal Locations for CCDS 9877.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 85621515 85623497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGGGCCTACAGACCACAAAGTGGCCCAGCCATGGGGCTTTTTTCCTGAAGTCTTGGCTTATCATTTCCC
TGGGGCTCTACTCACAGGTGTCCAAACTCCTGGCCTGCCCTAGTGTGTGCCGCTGCGACAGGAACTTTGT
CTACTGTAATGAGCGAAGCTTGACCTCAGTGCCTCTTGGGATCCCGGAGGGCGTAACTGTACTCTACCTC
CACAACAACCAAATTAATAATGCTGGATTTCCTGCAGAACTGCACAATGTACAGTCGGTGCACACGGTCT
ACCTGTATGGCAACCAACTGGACGAATTCCCCATGAACCTTCCCAAGAATGTCAGAGTTCTCCATTTGCA
GGAAAACAATATTCAGACCATTTCACGGGCTGCTCTTGCCCAGCTCTTGAAGCTTGAAGAGCTGCACCTG
GATGACAACTCCATATCCACAGTGGGGGTGGAAGACGGGGCCTTCCGGGAGGCTATTAGCCTCAAATTGT
TGTTTTTGTCTAAGAATCACCTGAGCAGTGTGCCTGTTGGGCTTCCTGTGGACTTGCAAGAGCTGAGAGT
GGATGAAAATCGAATTGCTGTCATATCCGACATGGCCTTCCAGAATCTCACGAGCTTGGAGCGTCTTATT
GTGGACGGGAACCTCCTGACCAACAAGGGTATCGCCGAGGGCACCTTCAGCCATCTCACCAAGCTCAAGG
AATTTTCAATTGTACGTAATTCGCTGTCCCACCCTCCTCCCGATCTCCCAGGTACGCATCTGATCAGGCT
CTATTTGCAGGACAACCAGATAAACCACATTCCTTTGACAGCCTTCTCAAATCTGCGTAAGCTGGAACGG
CTGGATATATCCAACAACCAACTGCGGATGCTGACTCAAGGGGTTTTTGATAATCTCTCCAACCTGAAGC
AGCTCACTGCTCGGAATAACCCTTGGTTTTGTGACTGCAGTATTAAATGGGTCACAGAATGGCTCAAATA
TATCCCTTCATCTCTCAACGTGCGGGGTTTCATGTGCCAAGGTCCTGAACAAGTCCGGGGGATGGCCGTC
AGGGAATTAAATATGAATCTTTTGTCCTGTCCCACCACGACCCCCGGCCTGCCTCTCTTCACCCCAGCCC
CAAGTACAGCTTCTCCGACCACTCAGCCTCCCACCCTCTCTATTCCAAACCCTAGCAGAAGCTACACGCC
TCCAACTCCTACCACATCGAAACTTCCCACGATTCCTGACTGGGATGGCAGAGAAAGAGTGACCCCACCT
ATTTCTGAACGGATCCAGCTCTCTATCCATTTTGTGAATGATACTTCCATTCAAGTCAGCTGGCTCTCTC
TCTTCACCGTGATGGCATACAAACTCACATGGGTGAAAATGGGCCACAGTTTAGTAGGGGGCATCGTTCA
GGAGCGCATAGTCAGCGGTGAGAAGCAACACCTGAGCCTGGTTAACTTAGAGCCCCGATCCACCTATCGG
ATTTGTTTAGTGCCACTGGATGCTTTTAACTACCGCGCGGTAGAAGACACCATTTGTTCAGAGGCCACCA
CCCATGCCTCCTATCTGAACAACGGCAGCAACACAGCGTCCAGCCATGAGCAGACGACGTCCCACAGCAT
GGGCTCCCCCTTTCTGCTGGCGGGCTTGATCGGGGGCGCGGTGATATTTGTGCTGGTGGTCTTGCTCAGC
GTCTTTTGCTGGCATATGCACAAAAAGGGGCGCTACACCTCCCAGAAGTGGAAATACAACCGGGGCCGGC
GGAAAGATGATTATTGCGAGGCAGGCACCAAGAAGGACAACTCCATCCTGGAGATGACAGAAACCAGTTT
TCAGATCGTCTCCTTAAATAACGATCAACTCCTTAAAGGAGATTTCAGACTGCAGCCCATTTACACCCCA
AATGGGGGCATTAATTACACAGACTGCCATATCCCCAACAACATGCGATACTGCAACAGCAGCGTGCCAG
ACCTGGAGCACTGCCATACGTGA

Translation (660 aa):
MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLGIPEGVTVLYL
HNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENNIQTISRAALAQLLKLEELHL
DDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPVDLQELRVDENRIAVISDMAFQNLTSLERLI
VDGNLLTNKGIAEGTFSHLTKLKEFSIVRNSLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLER
LDISNNQLRMLTQGVFDNLSNLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAV
RELNMNLLSCPTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSLVNLEPRSTYR
ICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSPFLLAGLIGGAVIFVLVVLLS
VFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSILEMTETSFQIVSLNNDQLLKGDFRLQPIYTP
NGGINYTDCHIPNNMRYCNSSVPDLEHCHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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