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Report for CCDS14999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14999.1 Public Mus musculus 1 Adam23 23 108 98 CCDS HistoryNCBI Gene:23792Re-query CCDS DB by CCDS ID:14999.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14999.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087374.9 ENSMUSP00000084633.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087374.9Link to Ensembl Protein Viewer:ENSMUSP00000084633.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000087374Re-query CCDS DB by Protein ID:ENSMUSP00000084633
Original member Current member NCBI NM_011780.3 NP_035910.1 Accepted alive Link to Nucleotide Sequence:NM_011780.3Link to Protein Sequence:NP_035910.1Re-query CCDS DB by Nucleotide ID:NM_011780Re-query CCDS DB by Protein ID:NP_035910Link to BLAST:NP_035910.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035910.1 829 Q9R1V7-1 829 100% 0 0

Chromosomal Locations for CCDS 14999.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 63446211 63446412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63447728 63447948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63477679 63477755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63515577 63515640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63528758 63528840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63530235 63530298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63534286 63534358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63535135 63535208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63536919 63536984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63543119 63543190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63545431 63545594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63546416 63546500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63547727 63547817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63549747 63549795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63551761 63551860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63555155 63555226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63555814 63555903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63557408 63557488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63563409 63563459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63564145 63564208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63566602 63566707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63567849 63567968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63570910 63571078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63572887 63572998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63585365 63585455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63592608 63592656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2490 nt):
ATGAAGCCGCCCGGCAGCATCTCCCGGCGGCCGACCCTGACGGGTTGCAGCCTTCCCGGCGCCTCCTGCG
GCCCCGGCCGCTGCCCCGCCGGCCCGGTGCCGGCCCGCGCGCCGCCCTGCCGCCTGCTCCTCGTCCTTCT
CCTGCTACCTGCGCTCGCCACCTCATCCCGGCCCCGTGCCCGGGGGGCCGCTGCGCCCAGCGCTCCGCAC
TGGAATGAAACTGCAGAAAAAACCCTGGGAGTCCTGGCAGATGAAGACAACACATTGCAACAAAATAGCA
GCAGCAGAAATACCAGCTACAGCAGTGCAGTGCAAAAAGAAATCACACTGCCTTCAAGACTGGTGTATTA
CATCAACCAGGACTCAGAAAGCCCCTATCATGTTCTTGACACAAAGGCCAGACACCAACAGAAACACAAT
AAGGCTGTGCATCTGGCCCAGGCAAGCTTCCAGATCGAAGCTTTCGGCTCCAAGTTCATTCTTGACCTCA
CACTGAACAATGGTTTGCTATCTTCTGACTACGTGGAGATCCACTATGAAGACGGGAAGCAGATGTACTC
TAAGGGTGGAGAGCACTGTTACTACCACGGAAGCATCAGAGGCGTCAAGGATTCCAGGGTGGCTCTATCG
ACCTGCAATGGACTCCATGGCATGTTTGAGGATGACACCTTTGTGTATATGATAGAGCCGCTGGAACTGA
CTGATGATGAGAAAAGCACAGGCCGACCACACATAATCCAGAAAACCTTGGCAGGACAGTATTCTAAGCA
GATGAAGAATCTCAGCACAGATGGCAGTGACCAGTGGCCTTTGCTACCTGAATTACAATGGCTGAGAAGA
AGGAAAAGAGCGGTCAATCCATCTCGTGGTGTGTTTGAAGAAATGAAGTATTTGGAGCTTATGATTGTTA
ATGATCACAAGACGTATAAGAAGCACCGCTCTTCTCACGCGCATACCAACAACTTCGCAAAGTCTGTGGT
CAACCTTGTAGATTCTATTTACAAGGAACAGCTCAACACCAGGGTTGTCCTGGTGGCTGTCGAGACCTGG
ACCGAGAAGGATCACATTGACATCACCATCAACCCCGTGCAGATGCTACATGACTTCTCCAAGTACCGGC
AGCGAATCAAACAGCACGCTGACGCGGTCCACCTCATCTCGCGCGTGACATTCCATTATAAGAGAAGCAG
TCTGAGTTACTTTGGAGGCGTGTGTTCTCGAATAAGAGGGGTTGGTGTGAATGAGTATGGTCTTCCAATG
GCGGTGGCACAAGTATTATCACAGAGCCTGGCTCAAAACCTTGGAATCCAGTGGGAACCTTCGAGCAGGA
AGCCAAAATGTGAATGCATAGAGTCCTGGGGCGGCTGCATCATGGAAGAAACAGGGGTGTCCCACTCTCG
AAAGTTCTCAAAGTGCAGCATTTTGGAGTACAGAGACTTTTTACAGAGAGGTGGCGGAGCATGTCTTTTC
AATAGGCCAACTAAGCTGTTTGAGCCCACGGAATGTGGAAATGGATATGTGGAGGCCGGGGAGGAATGCG
ACTGTGGTTTCCATGTGGAATGCTATGGAGTTTGCTGTAAGAAGTGTTCGCTCTCCAATGGGGCCCACTG
CAGTGACGGCCCCTGCTGTAACAACACCTCATGTCTTTTTCAGTCACGAGGGTATGAATGTCGGGATGCC
GTAAACAGCTGTGATATCACCGAGTACTGCACTGGAGACTCTGGCCAGTGCCCACCGAACCTCCATAAAC
AAGATGGCTATAGCTGCAATCAAAATCAGGGTCGCTGCTACAATGGCGAGTGCAAGACAAGGGACAATCA
ATGCCAGTACATCTGGGGGACAAAGGCTGCGGGGTCAGACAAGTTCTGCTATGAAAAGCTGAACACGGAA
GGCACCGAGAAGGGCAATTGTGGAAAGGATGGAGACCGGTGGATCCCGTGCAGCAAGCATGATGTGTTCT
GTGGATTTCTGCTTTGCACCAATCTTACCCGAGCTCCACGTATCGGTCAACTTCAAGGAGAGATCATCCC
GACTTCCTTCTATCATCAAGGCCGAGTGATTGACTGCAGTGGTGCTCATGTAGTTTTAGACGATGATACA
GACGTGGGTTACGTTGAAGATGGGACTCCGTGTGGCCCCTCCATGATGTGCTTAGATCGGAAGTGCCTAC
AGATTCAAGCCCTGAATATGAGCAGCTGCCCACTTGACTCAAGGGGTAAAGTCTGCTCCGGCCACGGGGT
GTGTAGCAACGAAGCCACCTGCATCTGTGATTTCACTTGGGCAGGCACAGACTGCAGCATCCGGGATCCA
GTTCGGAACCCCAACCCCCCTAAGGATGAAGGCCCTAAGGGTCCTAGCGCCACCAATCTCATAATAGGCT
CCATCGCTGGTGCCATCCTGGTAGCAGCTATTGTCCTTGGGGGCACAGGCTGGGGATTTAAAAACGTCAA
GAAGAGGAGATTCGATCCCACTCAGCAAGGCCCCATCTGA

Translation (829 aa):
MKPPGSISRRPTLTGCSLPGASCGPGRCPAGPVPARAPPCRLLLVLLLLPALATSSRPRARGAAAPSAPH
WNETAEKTLGVLADEDNTLQQNSSSRNTSYSSAVQKEITLPSRLVYYINQDSESPYHVLDTKARHQQKHN
KAVHLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYEDGKQMYSKGGEHCYYHGSIRGVKDSRVALS
TCNGLHGMFEDDTFVYMIEPLELTDDEKSTGRPHIIQKTLAGQYSKQMKNLSTDGSDQWPLLPELQWLRR
RKRAVNPSRGVFEEMKYLELMIVNDHKTYKKHRSSHAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETW
TEKDHIDITINPVQMLHDFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVCSRIRGVGVNEYGLPM
AVAQVLSQSLAQNLGIQWEPSSRKPKCECIESWGGCIMEETGVSHSRKFSKCSILEYRDFLQRGGGACLF
NRPTKLFEPTECGNGYVEAGEECDCGFHVECYGVCCKKCSLSNGAHCSDGPCCNNTSCLFQSRGYECRDA
VNSCDITEYCTGDSGQCPPNLHKQDGYSCNQNQGRCYNGECKTRDNQCQYIWGTKAAGSDKFCYEKLNTE
GTEKGNCGKDGDRWIPCSKHDVFCGFLLCTNLTRAPRIGQLQGEIIPTSFYHQGRVIDCSGAHVVLDDDT
DVGYVEDGTPCGPSMMCLDRKCLQIQALNMSSCPLDSRGKVCSGHGVCSNEATCICDFTWAGTDCSIRDP
VRNPNPPKDEGPKGPSATNLIIGSIAGAILVAAIVLGGTGWGFKNVKKRRFDPTQQGPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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