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Report for CCDS26208.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26208.1 Public Mus musculus 12 Adam6a 23 108 98 CCDS HistoryNCBI Gene:238406Re-query CCDS DB by CCDS ID:26208.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26208.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053086.2 ENSMUSP00000059315.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053086.2Link to Ensembl Protein Viewer:ENSMUSP00000059315.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000053086Re-query CCDS DB by Protein ID:ENSMUSP00000059315
Original member Current member NCBI NM_174885.3 NP_777479.2 Accepted alive Link to Nucleotide Sequence:NM_174885.3Link to Protein Sequence:NP_777479.2Re-query CCDS DB by Nucleotide ID:NM_174885Re-query CCDS DB by Protein ID:NP_777479Link to BLAST:NP_777479.2

Chromosomal Locations for CCDS 26208.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 113544009 113546273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2265 nt):
ATGTTATCTCTGACCTGGGGCATGAGGCTAGTGGAAAGACCTGTGGTCCCCAGGGTCCTCCTCTTGCTAT
TTGCACTCTGGCTGCTCCTCCTGGTTCCAGTCTGGTGTTCTCAAGGCCATCCCACTTGGCGTTACATCTC
ATCGGAGGTGGTTATTCCTCGGAAGGAGATCTACCATACCAAAGGACTTCAAGCACAAAGACTGCTCTCG
TATAGCTTGCGTTTTCGGGGCCAGAGACATATCATCCACCTGCGGAGAAAGACACTCATTTGGCCCAGAC
ACTTGTTGCTGACAACTCAAGATGACCAAGGAGCCTTACAGATGGAGTACCCCTTTTTTCCTGTAGATTG
TTACTATATTGGCTACCTGGAGGGGATCCTGCAATCCATGGTCACTGTGGATACTTGTTATGGGGGCCTG
TCAGGGGTCATAAAGTTGGATAACCTTACCTATGAAATCAAACCCCTCAATGATTCACAGAGCTTTGAAC
ACCTTGTTTCTCAGATAGTATCTGAGTCTGATGACACAGGGCCTATGAATGCATGGAAGCACTGGAGCCA
TAATACAGGTTCTCCCTCCTCCAGATTGGAATATGCAGATGGAGCTCCCAGACTATCTAGTAAGAATTAC
GCTACACATCCAGCTGCTATAAAAGGCCACTTTCAAGCAACCCATTCTGTATATAGTGCTTCTGGAGGTG
ACAAACTTTCATCTACTGTTGAGTATTTGTTTAAAGTCATTAGTTTAATGGACACCTATCTGACCAATCT
TCATATGCGGTACTATGTCTTTCTCATGACTGTGTATACCGAGGCTGATCCATTTTCACAAGATTTTCGA
GTTCCAGGAGGGCAGGCTCATACTTTCTATGAGAGAGTATTTTATGCTCATTTTAGGCCTGATGCAGGAG
CTATAATTAACAAGAATTCGCCAGGAGATGATGCTGTTAATCCAGCTGAGAGGAGTATATGTTCTCCCTC
AGCCCTAATTTGTCTTGGTCAACATGGTCGAAATCCTTTATTTTTATCTATTATAATAACCAATCGTGTT
GGAAGGAGTTTAGGCCTAAAACATGATGAGGGGTACTGTATCTGCCAGAGAAGGAACACCTGCATCATGT
TCAAAAATCCTCAATTAACAGATGCTTTCAGCAATTGTTCCCTTGCAGAGATAAGCAACATACTTAATAC
TCCTGATCTGATGCCATGTCTTTTCTATGACCGTCATGTTTATTATAATACATCATTGACTTATAAGTTT
TGTGGAAACTTCAAAGTAGATAACAATGAGCAGTGTGACTGTGGCTCCCAAAAGGCATGTTATTCAGATC
CCTGCTGTGGAAATGATTGCAGGTTAACACCTGGTAGCATTTGTGATAAAGAATTATGCTGTGCAAATTG
CACTTACAGTCCTTCTGGGACACTCTGCAGACCTATCCAGAACATATGTGATCTTCCAGAGTACTGTAGT
GGCTCTAAGTTCATTTGCCCAGATGACACTTATCTGCAAGATGGGACACCATGCTCAGAAGAGGGTTACT
GCTATAAAGGTAACTGCACTGATCGCAACATACAATGCATGGAAATCTTTGGTGTAAGTGCTAAGAATGC
TAATATTAAGTGCTATGACATCAACAAACAACGGTTTCGATTTGGGCATTGTACTAGAGCAGAAGAAAGC
CTCACATTCAATGCTTGTGCTGATCAGGACAAGCTGTGTGGAAGGTTGCAGTGTACCAATGTCACCAATC
TTCCATTTTTGCAAGAACATGTTTCATTCCATCAATCGGTTATCTCTGGGGTTACCTGCTTTGGGCTTGA
TGAACATCGTGGGACAGAAACAGCAGATGCTGGATTGGTGAGACATGGTACCCCGTGTTCAAGGGGTAAG
TTCTGTGATCGAGGAGCTTGCAATGGAAGTTTATCTCGTTTGGGTTATGACTGCACCCCAGAAAAATGCA
ATTTCAGAGGAGTGTGTAACAATCGTCGGAATTGCCATTGCCATTTTGGTTGGAGCCCTCCAAAGTGCAA
AGAAGAGGGACACAGTGGGAGCATAGACAGTGGGTCCCCTCCGGTTCAAAGGCGCATAATAAAACAGAAC
CTAGAGCCAGTAGTGTATTTAAGAATACTCTTTGGTCGTATTTACTTCCTCTTTGTTGCACTGCTCTTTG
GCATTGCCACTCGTGTAGGAGTTACTAAGATATTTAGGTTTGAAGACTTGCAAGCTGCTTTACGTTCTTG
GCAAGAACAAGCAAAGGACAAGTAA

Translation (754 aa):
MLSLTWGMRLVERPVVPRVLLLLFALWLLLLVPVWCSQGHPTWRYISSEVVIPRKEIYHTKGLQAQRLLS
YSLRFRGQRHIIHLRRKTLIWPRHLLLTTQDDQGALQMEYPFFPVDCYYIGYLEGILQSMVTVDTCYGGL
SGVIKLDNLTYEIKPLNDSQSFEHLVSQIVSESDDTGPMNAWKHWSHNTGSPSSRLEYADGAPRLSSKNY
ATHPAAIKGHFQATHSVYSASGGDKLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPFSQDFR
VPGGQAHTFYERVFYAHFRPDAGAIINKNSPGDDAVNPAERSICSPSALICLGQHGRNPLFLSIIITNRV
GRSLGLKHDEGYCICQRRNTCIMFKNPQLTDAFSNCSLAEISNILNTPDLMPCLFYDRHVYYNTSLTYKF
CGNFKVDNNEQCDCGSQKACYSDPCCGNDCRLTPGSICDKELCCANCTYSPSGTLCRPIQNICDLPEYCS
GSKFICPDDTYLQDGTPCSEEGYCYKGNCTDRNIQCMEIFGVSAKNANIKCYDINKQRFRFGHCTRAEES
LTFNACADQDKLCGRLQCTNVTNLPFLQEHVSFHQSVISGVTCFGLDEHRGTETADAGLVRHGTPCSRGK
FCDRGACNGSLSRLGYDCTPEKCNFRGVCNNRRNCHCHFGWSPPKCKEEGHSGSIDSGSPPVQRRIIKQN
LEPVVYLRILFGRIYFLFVALLFGIATRVGVTKIFRFEDLQAALRSWQEQAKDK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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