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Report for CCDS29363.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29363.1 Public Mus musculus 18 Pard6g 23 108 98 CCDS HistoryNCBI Gene:93737Re-query CCDS DB by CCDS ID:29363.1Re-query CCDS DB by GeneID:93737See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29363.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070219.8 ENSMUSP00000069182.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070219.8Link to Ensembl Protein Viewer:ENSMUSP00000069182.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000070219Re-query CCDS DB by Protein ID:ENSMUSP00000069182
Original member Current member NCBI NM_053117.3 NP_444347.3 Accepted alive Link to Nucleotide Sequence:NM_053117.3Link to Protein Sequence:NP_444347.3Re-query CCDS DB by Nucleotide ID:NM_053117Re-query CCDS DB by Protein ID:NP_444347Link to BLAST:NP_444347.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444347.3 382 Q9JK84 382 100% 0 0

Chromosomal Locations for CCDS 29363.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 80047071 80047142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 80079825 80080047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 80116969 80117822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1149 nt):
ATGAACCGGAGTTTTCATAAGTCTCAGACCCTACGCTTCTACGACTGCAGCGCTGTGGAAGTCAAGAGCA
AGTTTGGCGCCGAGTTCCGAAGGTTCTCCTTGGACCGCCACAAGCCTGGGAAGTTTGAAGATTTCTACCA
GCTGGTGGTGCACACCCACCACATCTCTAACACCGAGGTGACCATCGGCTATGCTGATGTGCACGGGGAC
CTGCTGCCCATCAACAATGACGACAACTTCTGCAAGGCAGTCTCAAGTGCAAACCCCTTGCTTCGAGTCT
TCATCCAGAAACGAGAAGAAGCAGACCATTACAGCTTCGGAGCAGGCACTCTGTCACGGAAGAAAAAGGT
GCTGGTGACCCTGAGGGATGACGGTCTGCGTCGGCGTCCCCACCTCAACATCAGCATGCCGCATGACTTC
CGCCCAGTGTCATCCATCATTGACGTGGACATCCTCCCGGAGACGCACCGCCGAGTGAGGCTCTACAGAC
ACGGTTATGAGAAGCCACTGGGCTTCTACATTCGAGATGGCACCAGCGTGCGGGTGACGCCCCATGGGCT
AGAAAAGGTACCAGGTATCTTCATTTCTCGAATGGTACCCGGGGGCCTTGCGGAGAGCACTGGGCTACTG
GCTGTGAATGATGAAGTCCTGGAGGTGAATGGGATTGAGGTAGCTGGAAAGACCTTGGATCAAGTCACAG
ACATGATGATAGCCAACAGCCACAACCTCATTGTCACTGTCAAGCCGGCCAACCAAAGGAACAATGTGGT
CCGCAGCAGCCGCACGTCCGGCAGCTCTGTGCATTCCACAGACAGCACCACCAGTCACCACAGCCTGCCA
GGTGCCCATGTCCTGCAGAATTCTGAGGACGTGGAGAGTGACGAGGAAGCCGACATTGTCATTGAAGGGG
CTCTAGAACCTCAACACATTCCCAAGACGCAGGCTGTACCTCCAGGCAGCCTCTCCAGGGCCAATGGCAC
CAGCCTTGCTCACGGGCTGCACAGAAGGGACATGAGCCTGCATAGCTCTGGGAGGGAGAGCAACGGCAGC
ATCCACAGATTTCTCAGCTCTCTGAAGCCAGACCCCCGACACAGCCTGGTCCTCCCCCAAGGAGGGGTGG
AGGAACATGGGCCAGCCATTACACTCTAG

Translation (382 aa):
MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTEVTIGYADVHGD
LLPINNDDNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKKKVLVTLRDDGLRRRPHLNISMPHDF
RPVSSIIDVDILPETHRRVRLYRHGYEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLL
AVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIVTVKPANQRNNVVRSSRTSGSSVHSTDSTTSHHSLP
GAHVLQNSEDVESDEEADIVIEGALEPQHIPKTQAVPPGSLSRANGTSLAHGLHRRDMSLHSSGRESNGS
IHRFLSSLKPDPRHSLVLPQGGVEEHGPAITL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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