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Report for CCDS40768.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40768.1 Public Mus musculus 9 Impdh2 23 108 98 CCDS HistoryNCBI Gene:23918Re-query CCDS DB by CCDS ID:40768.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40768.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081111.13 ENSMUSP00000079888.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081111.13Link to Ensembl Protein Viewer:ENSMUSP00000079888.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000081111Re-query CCDS DB by Protein ID:ENSMUSP00000079888
Original member NCBI NM_011830.4 NP_035960.2 Updated not alive Link to Nucleotide Sequence:NM_011830.4Link to Protein Sequence:NP_035960.2Re-query CCDS DB by Nucleotide ID:NM_011830Re-query CCDS DB by Protein ID:NP_035960
Current member NCBI NM_011830.5 NP_035960.2 Accepted alive Link to Nucleotide Sequence:NM_011830.5Link to Protein Sequence:NP_035960.2Re-query CCDS DB by Nucleotide ID:NM_011830Re-query CCDS DB by Protein ID:NP_035960Link to BLAST:NP_035960.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035960.2 514 P24547 514 100% 0 0

Chromosomal Locations for CCDS 40768.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108560534 108560631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108561034 108561082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108561597 108561698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108561783 108561857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108562174 108562380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108562792 108562879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108563136 108563335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108563421 108563511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108563596 108563691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108564635 108564778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108564866 108565010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108565102 108565245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108565327 108565410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108565498 108565519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGCGGACTACCTGATTAGCGGAGGCACCTCTTACGTGCCGGACGACGGGCTCACAGCGCAGCAGCTCT
TCAACTGCGGGGACGGCCTCACCTACAATGATTTTCTCATTCTTCCTGGGTATATCGACTTCACTGCAGA
TCAGGTGGACTTGACGTCTGCTCTAACTAAGAAGATTACACTAAAGACCCCATTGGTTTCCTCACCCATG
GACACTGTCACAGAGGCTGGAATGGCCATCGCGATGGCGCTTACAGGAGGTATTGGTTTCATCCACCACA
ACTGCACACCTGAATTCCAGGCCAATGAAGTTCGGAAAGTGAAGAAATACGAACAGGGATTCATCACTGA
CCCCGTGGTCCTTAGCCCCAAGGATCGTGTACGCGATGTTTTTGAGGCCAAAGCCAGGCATGGCTTCTGT
GGTATCCCCATCACAGATACAGGCCGGATGGGGAGTCGATTGGTGGGCATCATCTCCTCAAGGGACATTG
ATTTCCTCAAGGAGGAAGAGCATGACCGGTTCTTGGAAGAGATCATGACTAAGAGGGAAGATTTGGTGGT
CGCCCCTGCCGGCGTCACTCTGAAAGAGGCAAATGAGATTCTGCAGCGAAGTAAAAAGGGAAAGTTGCCC
ATTGTGAATGAAAATGATGAGCTGGTAGCCATCATTGCCCGGACAGACCTAAAGAAGAATCGTGATTACC
CCCTGGCCTCCAAAGATGCCAAGAAGCAACTGCTGTGTGGGGCAGCCATTGGCACTCATGAGGATGACAA
GTATAGGCTGGACTTACTGGCCCTTGCTGGTGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAACTCC
ATCTTCCAAATCAATATGATCAAATACATCAAGGAGAAGTATCCCAGTCTACAGGTCATTGGAGGCAATG
TAGTCACTGCTGCGCAAGCCAAGAACCTCATAGATGCAGGTGTAGATGCTTTGCGAGTCGGCATGGGAAG
TGGTTCCATCTGCATCACCCAGGAAGTGTTGGCCTGTGGGCGGCCCCAAGCCACAGCAGTGTACAAGGTC
TCTGAGTATGCCCGTCGCTTTGGTGTTCCTGTTATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTG
CCAAAGCTTTGGCTCTTGGGGCTTCCACAGTCATGATGGGCTCCCTCCTGGCTGCCACCACTGAGGCCCC
TGGCGAGTACTTCTTCTCAGATGGGATCCGGCTGAAGAAATACCGAGGTATGGGTTCTCTTGATGCCATG
GACAAACATCTCAGCAGCCAGAACCGATACTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAAGGAGTTT
CAGGGGCAGTGCAGGACAAGGGGTCTATCCACAAGTTCGTTCCTTACCTGATTGCTGGCATCCAGCATTC
CTGTCAGGACATTGGTGCCAAGAGTTTAACCCAAGTCAGAGCCATGATGTACTCGGGGGAGCTTAAATTT
GAGAAGAGGACATCCTCTGCTCAGGTGGAAGGTGGCGTCCACAGCCTCCATTCGTACGAGAAACGGCTTT
TCTGA

Translation (514 aa):
MADYLISGGTSYVPDDGLTAQQLFNCGDGLTYNDFLILPGYIDFTADQVDLTSALTKKITLKTPLVSSPM
DTVTEAGMAIAMALTGGIGFIHHNCTPEFQANEVRKVKKYEQGFITDPVVLSPKDRVRDVFEAKARHGFC
GIPITDTGRMGSRLVGIISSRDIDFLKEEEHDRFLEEIMTKREDLVVAPAGVTLKEANEILQRSKKGKLP
IVNENDELVAIIARTDLKKNRDYPLASKDAKKQLLCGAAIGTHEDDKYRLDLLALAGVDVVVLDSSQGNS
IFQINMIKYIKEKYPSLQVIGGNVVTAAQAKNLIDAGVDALRVGMGSGSICITQEVLACGRPQATAVYKV
SEYARRFGVPVIADGGIQNVGHIAKALALGASTVMMGSLLAATTEAPGEYFFSDGIRLKKYRGMGSLDAM
DKHLSSQNRYFSEADKIKVAQGVSGAVQDKGSIHKFVPYLIAGIQHSCQDIGAKSLTQVRAMMYSGELKF
EKRTSSAQVEGGVHSLHSYEKRLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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