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Report for CCDS15903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15903.1 Public Mus musculus 2 Lamc3 23 108 98 CCDS HistoryNCBI Gene:23928Re-query CCDS DB by CCDS ID:15903.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15903.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028187.6 ENSMUSP00000028187.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028187.6Link to Ensembl Protein Viewer:ENSMUSP00000028187.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028187Re-query CCDS DB by Protein ID:ENSMUSP00000028187
Original member Current member NCBI NM_011836.4 NP_035966.2 Accepted alive Link to Nucleotide Sequence:NM_011836.4Link to Protein Sequence:NP_035966.2Re-query CCDS DB by Nucleotide ID:NM_011836Re-query CCDS DB by Protein ID:NP_035966Link to BLAST:NP_035966.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035966.2 1581 Q9R0B6 1581 100% 0 0

Chromosomal Locations for CCDS 15903.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 31887344 31887743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31898230 31898534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31900475 31900605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31903430 31903596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31905608 31905796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31905909 31906026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31908594 31908692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31911991 31912127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31913036 31913146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31914614 31914806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31914960 31915078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31915858 31916082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31918428 31918616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31920503 31920748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31921632 31921782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31922333 31922475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31922927 31923105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31924568 31924709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31925538 31925743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31925981 31926057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31928792 31928923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31930634 31930781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31931882 31932025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31935729 31935831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31937890 31938089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31939511 31939657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31940687 31940786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31945170 31945414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4746 nt):
ATGGCTGTATCCAGGGTCCTGTCCCTCCTGGCAACGGTGGCATCGATGGCGCTGGTGATTCAGGAGACAC
ACTTCGCGGCAGGCGCGGACATGGGCTCTTGCTACGACGGTGTGGGACGCGCACAGCGCTGTCTGCCTGA
GTTCGAGAACGCGGCGTTCGGCCGACGCGCCGAGGCCTCCCACACGTGCGGACGGCCCCCGGAGGACTTC
TGTCCACACGTGGGGGCACCAGGGGCTGGGCTACAGTGCCAGCGCTGCGACGATGCTGACCCCGGACGAC
GCCACGACGCCTCCTACCTCACAGACTTCCACAGCCCCGATGACAGCACCTGGTGGCAGAGCCCATCCAT
GGCCTTCGGGGTGCAGTACCCCACCTCTGTTAACCTGACCTTGAGCTTAGGGAAGGCCTATGAGATTACC
TATGTGAGGCTGAAGTTCCACACCAGTCGCCCTGAGAGTTTTGCCATCTACAAGCGCACGTACGCCAGTG
GCCCCTGGGAGCCCTACCAATACTACAGTGCCTCCTGCCAGAAAACCTATGGCCGTCCTGAGGGCCACTA
CCTGCGACCGGGCGAGGATGAGAGGGTGGCCTTCTGCACCTCTGAGTTCAGTGACATCTCCCCCTTGAAC
GGGGGCAACGTGGCCTTCTCCACCCTGGAAGGCCGTCCCAGTGCCTACAACTTTGAGGAGAGCCCTGTGC
TGCAGGAGTGGGTCACCAGCACTGACATCCTGATCTCTCTAGATCGGCTCAACACGTTTGGGGATGACAT
CTTCAAGGACCCCAGAGTGCTCCAGTCTTACTACTACGCTGTGTCTGACTTCTCTGTGGGTGGCAGGTGC
AAATGCAATGGTCACGCCAGTGAATGCGAACCCAATGCGGCTGGTCAGCTGGCTTGCCGCTGTCAGCACA
ACACCACAGGAGTGGACTGCGAGCGTTGTCTGCCCTTCTTCCAGGACCGTCCGTGGGCCCGAGGCACCGC
CGAGGATGCCAACGAGTGTCTGCCCTGCAACTGCAGTGGGCACTCTGAGGAGTGCACGTTTGACAGGGAG
CTCTATCGGAGCACAGGCCATGGTGGGCACTGTCAGCGGTGCCGTGACCACACAACTGGGCCACACTGTG
AGCGCTGTGAGAAGAACTACTACAGATGGTCCCCGAAGACACCATGCCAACCCTGTGACTGCCACCCAGC
AGGCTCTCTGAGTCTCCAGTGTGACAACTCAGGCGTCTGTCCCTGCAAGCCCACAGTGACAGGCTGGAAG
TGTGATCGCTGCCTGCCTGGATTCCACTCACTCAGTGAGGGCGGCTGCAGACCCTGTGCCTGCAATGTCG
CCGGCAGCTTGGGCACCTGTGACCCCCGCAGTGGGAACTGTCCCTGCAAAGAGAATGTAGAAGGCAGCCT
GTGTGACAGATGCCGCCCTGGGACATTTAACCTGCAGCCCCACAATCCAGTGGGCTGCAGCAGCTGCTTC
TGTTATGGCCACTCCAAGGTGTGTTCTCCTGCTGCCGGGTTCCAGGAACACCACATCCGCTCAGACTTCC
GCCATGGAGCTGGTGGCTGGCAGATCAGAAGCATGGGAGTGTCCAAGCGTCCTCTGCAATGGAGCCAGAG
TGGGCTCCTCCTGGGCCTGCGAGGAGGGGAGGAACTCTCAGCCCCAAAGAAGTTCCTGGGAGACCAGAGA
CTCAGCTATGGACAGCCAGTCATACTGACCCTCCAAGTACCCCCTGGAGGCTCCCCACCTCCTATTCAGC
TGAGACTGGAGGGAGCAGGCTTGGCTCTGTCTCTGAGGCCCTCCAGTCTACCCAGCCCTCAGGACACCAG
GCAGCCAAGACGAGTTCAGCTCCAGTTCCTCTTGCAGGAGACTTCTGAGGAGGCAGAGTCCCCACTGCCC
ACCTTCCACTTCCAGCGCCTGCTTTCCAATCTGACTGCTCTGAGCATCTGGACCAGTGGCCAAGGACCGG
GCCATTCTGGCCAAGTGCTCTTGTGTGAAGTTCAGCTCACATCGGCCTGGCCCCAGCGTGAGCTTGCCCC
TCCAGCCTCTTGGGTGGAGACCTGCTTATGTCCCCAGGGATACACAGGCCAGTTCTGTGAATTCTGTGCT
CTGGGATACAAGAGAGAAATACCTCATGGGGGTCCCTATGCCAACTGCATTCCCTGCACCTGCAACCAGC
ATGGCACCTGTGACCCCAACACAGGGATCTGCCTGTGTGGCCACCACACCGAGGGTCCATCCTGTGAGCG
GTGCATGCCAGGTTTCTACGGTAACGCCTTCTCAGGCCGTGCTGATGATTGCCAGCCCTGTCCGTGCCCT
GGCCAATCAGCCTGTGCAACCATCCCAGAGAGTGGAGATGTGGTGTGCACACACTGCCCTCCTGGTCAGA
GAGGACGACGATGCGAGAGCTGCGAAGATGGCTTTTTTGGGGATCCTCTAGGGCTCTCTGGAGCTCCCCA
GCCCTGCCGCCGATGCCAGTGCAGCGGGAACGTGGATCTCAATGCTGTGGGCAACTGTGATCCTCATTCT
GGCCACTGCTTGCGCTGTCTGTACAACACGACAGGGGCCCACTGCGAGCACTGTCGGGAGGGTTTCTACG
GGAGTGCCGTGGCCACAAGGCCCGTGGACAAATGTGCTCCCTGCAGCTGTGACCTGAGGGGCTCAGTCAG
TGAGAAGACCTGCAACCCTGTGACTGGCCAGTGTGTCTGCCTGCCTTATGTCTCCGGGAGGGACTGCAGC
CGCTGCAGCCCTGGCTTCTATGACCTCCAGTCTGGGAGGGGCTGCCAGAGCTGCAAATGTCACCCACTTG
GATCCTTGGAGAATAAGTGCCACCCCAAGACTGGCCAGTGTCCCTGCCGACCTGGTGTCACTGGCCAAGC
CTGTGACAGATGCCAGCTAGGTTTCTTTGGCTTCTCCATCAAGGGCTGCCGAGACTGTAGGTGCTCCCCA
TTGGGTGCTGCCTCATCTCAGTGCCATGAGAACAGCACCTGTGTGTGCCGGCCCGGCTTTGTGGGCTATA
AATGCGACCGCTGCCAGGACAATTTCTTCCTCGCGGATGGCGACACAGGCTGCCAAGAGTGTCCCACTTG
CTATGCCCTAGTGAAGGAAGAGGCAGCCAAGCTGAAGGCCAGGTTGATGCTGATGGAGGGGTGGCTTCAA
AGGTCTGACTGTGGTAGCCCCTGGGGACCACTAGACATTCTGCAGGGAGAAGCCCCTCTGGGGGATGTCT
ACCAAGGTCACCACCTACTTCAAGAGACCCGGGGGACCTTCCTGCAGCAGATGGTGGGCCTGGAGGATTC
TGTGAAGGCCACTTGGGAGCAGTTGCAGGTGCTGAGAGGGCATGTACACTGTGCCCAGGCTGGAGCTCAG
AAGACCTGCATCCAGCTGGCAGAGCTGGAGGAGACATTGCAGTCCTCAGAGGAGGAGGTCCTTCGTGCAG
CCTCAGCTCTCTCATTTCTGGCAAGTCTTCAGAAAGGATCCAGCACACCCACCAATTGGAGTCACCTGGC
ATCAGAGGCCCAGATCCTTGCCAGAAGCCACAGGGACACGGCCACCAAGATCGAAGCTACCTCGGAAAGG
GCCCTGCTCGCCTCCAACGCCAGCTATGAGCTCCTGAAGCTGATGGAAGGCAGAGTGGCCTCGGAAGCCC
AGCAGGAACTGGAGGACAGGTACCAGGAGGTGCAGGCAGCTCAGACTGCCCTGGGCATAGCTGTGGCAGA
GGCGCTGCCCAAAGCTGAAAAGGCACTGGCCACGGTGAAGCAAGTCATTGGTGACGCAGCCCCACATCTA
GGCTTGCTGGTCACCCCTGAAGCAATGAACTTCCAAGCCAGGGGCCTGAGCTGGAAAGTGAAGGCCCTGG
AGCAGAAGCTGGAGCAGAAGGAGCCCGAGGTGGGCCAGTCTGTGGGAGCCCTGCAGGTGGAGGCTGGAAG
AGCCTTGGAGAAGATGGAGCCCTTTATGCAGCTACGCAATAAGACCACAGCTGCCTTCACACGGGCTTCC
TCAGCTGTGCAAGCTGCCAAGGTGACCGTCATAGGAGCAGAGACCCTGCTAGCTGACCTAGAGGGAATGA
AGCTGAGGTCTCCTCTACCCAAGGAGCAGGCAGCGCTGAAGAAGAAAGCAGGCAGCATCAGGACCAGGCT
CCTGGAGGACACAAAGAGGAAGACCAAGCAGGCAGAGAGGATGCTGGGAAATGCTGCCTCTCTCTCCTCC
AGCACCAAGAAGAAAAGCAAAGAAGCAGAACTGATGTCTAAGGACAATGCCAAGCTCTCCAGAGCTTTGC
TGAGGGAAGGCAAGCAGGGCTACCGTCATGCCAGCCGACTCGCCAGCCAGACCCAGGCCACACTCCGTCG
GGCCTCTCGCCTGCTGCTGACCTCAGAAGCACACAAGCAGGAGCTGGAGGAAGCTAAACAGGTGACCTCT
GGGCTGAGCACTGTGGAGCGCCAGATCCGAGAGTCTCGGATCTCCTTGGAGAAGGACACCAAGGTCCTGT
CAGAGCTGCTTGTGAAGCTGGGGTCCCTGGGTGTCCACCAAGCCCCTGCTCAGACCCTGAACGAGACCCA
GCGGGCACTAGAAAGCTTGAGGCTGCAGCTGGATTCCCACGGAGCCCTGCATCACAAACTGAGGCAGCTG
GAGGAAGAGTCTGCTCGACAGGAGCTGCAGATTCAGAGCTTTGAGGACGACCTTGCTGAGATCCGCGCTG
ACAAGCACAACTTGGAGACCATTCTGAGCAGTCTGCCAGAGAACTGTGCCAGCTAG

Translation (1581 aa):
MAVSRVLSLLATVASMALVIQETHFAAGADMGSCYDGVGRAQRCLPEFENAAFGRRAEASHTCGRPPEDF
CPHVGAPGAGLQCQRCDDADPGRRHDASYLTDFHSPDDSTWWQSPSMAFGVQYPTSVNLTLSLGKAYEIT
YVRLKFHTSRPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCTSEFSDISPLN
GGNVAFSTLEGRPSAYNFEESPVLQEWVTSTDILISLDRLNTFGDDIFKDPRVLQSYYYAVSDFSVGGRC
KCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLPCNCSGHSEECTFDRE
LYRSTGHGGHCQRCRDHTTGPHCERCEKNYYRWSPKTPCQPCDCHPAGSLSLQCDNSGVCPCKPTVTGWK
CDRCLPGFHSLSEGGCRPCACNVAGSLGTCDPRSGNCPCKENVEGSLCDRCRPGTFNLQPHNPVGCSSCF
CYGHSKVCSPAAGFQEHHIRSDFRHGAGGWQIRSMGVSKRPLQWSQSGLLLGLRGGEELSAPKKFLGDQR
LSYGQPVILTLQVPPGGSPPPIQLRLEGAGLALSLRPSSLPSPQDTRQPRRVQLQFLLQETSEEAESPLP
TFHFQRLLSNLTALSIWTSGQGPGHSGQVLLCEVQLTSAWPQRELAPPASWVETCLCPQGYTGQFCEFCA
LGYKREIPHGGPYANCIPCTCNQHGTCDPNTGICLCGHHTEGPSCERCMPGFYGNAFSGRADDCQPCPCP
GQSACATIPESGDVVCTHCPPGQRGRRCESCEDGFFGDPLGLSGAPQPCRRCQCSGNVDLNAVGNCDPHS
GHCLRCLYNTTGAHCEHCREGFYGSAVATRPVDKCAPCSCDLRGSVSEKTCNPVTGQCVCLPYVSGRDCS
RCSPGFYDLQSGRGCQSCKCHPLGSLENKCHPKTGQCPCRPGVTGQACDRCQLGFFGFSIKGCRDCRCSP
LGAASSQCHENSTCVCRPGFVGYKCDRCQDNFFLADGDTGCQECPTCYALVKEEAAKLKARLMLMEGWLQ
RSDCGSPWGPLDILQGEAPLGDVYQGHHLLQETRGTFLQQMVGLEDSVKATWEQLQVLRGHVHCAQAGAQ
KTCIQLAELEETLQSSEEEVLRAASALSFLASLQKGSSTPTNWSHLASEAQILARSHRDTATKIEATSER
ALLASNASYELLKLMEGRVASEAQQELEDRYQEVQAAQTALGIAVAEALPKAEKALATVKQVIGDAAPHL
GLLVTPEAMNFQARGLSWKVKALEQKLEQKEPEVGQSVGALQVEAGRALEKMEPFMQLRNKTTAAFTRAS
SAVQAAKVTVIGAETLLADLEGMKLRSPLPKEQAALKKKAGSIRTRLLEDTKRKTKQAERMLGNAASLSS
STKKKSKEAELMSKDNAKLSRALLREGKQGYRHASRLASQTQATLRRASRLLLTSEAHKQELEEAKQVTS
GLSTVERQIRESRISLEKDTKVLSELLVKLGSLGVHQAPAQTLNETQRALESLRLQLDSHGALHHKLRQL
EEESARQELQIQSFEDDLAEIRADKHNLETILSSLPENCAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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