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Report for CCDS28406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28406.1 Public Mus musculus 17 Dact2 23 108 98 CCDS HistoryNCBI Gene:240025Re-query CCDS DB by CCDS ID:28406.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28406.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053218.6 ENSMUSP00000051638.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053218.6Link to Ensembl Protein Viewer:ENSMUSP00000051638.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000053218Re-query CCDS DB by Protein ID:ENSMUSP00000051638
Original member Current member NCBI NM_172826.3 NP_766414.3 Accepted alive Link to Nucleotide Sequence:NM_172826.3Link to Protein Sequence:NP_766414.3Re-query CCDS DB by Nucleotide ID:NM_172826Re-query CCDS DB by Protein ID:NP_766414Link to BLAST:NP_766414.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766414.3 757 Q7TN08 757 100% 0 0

Chromosomal Locations for CCDS 28406.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 14195663 14197311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 14197817 14198092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 14199146 14199278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 14203514 14203729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGTGGGCACCGAGCGGCCAGGGGCCCGCGGGTTGGGACCGCCGCAGGGTGGGCGCGCGACTACGAGCCG
CACTGGCCGGGCTGCAGGAGCTTCAGGGGCTGCGAGCCACGCAGCAAGCACGCGTGCGGGGAGCTCTGGG
CCTGCACCCTGCGCCAGGGCCCCGCGGCCAGGAGCTGCGTCTGGAGGCGGCGCTGACCGCGCTACGGGAG
CAGCTGTCACGGCTAAGGAGACAGGATGCTGGCCTGAAGACACACTTGGACCAGCTGGATCAGCAGATAA
GTGAACTACAGCTGGATGTGAGCAGGTCTTCTTGCGAGGCCTTGGATAGTGACAGCAGACCCAGCTCAGG
TTTCTATGAGCTGAGCGATGCTGGTTCCTGTTCTCTGTCCACCTCCTGCGCATCTGTTTGCAGCGACCGT
CTATCCCCCTCCCTGGGTAGCTGGCTGCCTGTGTTCCAGCCCTCCAAGTCCAGGTCTGGCATCGGGGACT
GGCGACCACGCTCTGCTGATGAGACCACTGTCCCTGCATGGAGCCCACAGCTCACAGAAGATAGCAGGCT
CCTGCATGGTGCAGAGGGCACAGGCCGGCTGACGGGCATGTTCCGGCCCAGACCAGTATCTACAGGTGAT
CTCGAAAGAGTCCTTCCAGCTGACGTGGGGCTCCAGAGAGCTGGTACTGATGCTGCACATCTCCTGGGCC
AGGGGATAGAGATCCCAGCCCACGCCCTGGACCCCACGTACCAGCGTGACCTGGTGGCCAGGGGAGGCCA
GGAGGTGTACCCATATCCCAGCCCCCTCCATGCGGTGGCCCTGCAGAGTCCCCTCTTCGCTCTGCCCAAA
GAAGCCCCGTGTTTTGACATCTGCTCACCTCCCCAGGAGCCTCCTCTGGTCCCTGTTGATGAGAACAGGA
CTCAACCTGAGCCGATCCGTGAGCTGGGCTCAGCCGAAGCCTACATCCACAGGCTGTTGCATCTGCGGGG
CCAAGAGCTCCCCCTGAGAGATGTGGGGCAGGAGCAGGGAGGTGACACAGCTGCTTTTCCACCGAAGCCC
TGTGGCCAGAGGTCGGAGAGCACATGTCAGCTGGAGAAGCAGGCCTGTGGAGCTGACAGGGGAGGACTGA
AACTAGGTAGGGGTGCTGCCAAGGACAGCCTCAAGCAACATGGGCCTGTGTCCCTTGTGGGTGCTGAGCC
CCTCAGCAGCCCCCTAAAGGAAGAAACCATTCCTTGGAATCCCTGTGTCCATGGAGACAATACTGTTGGT
TCCTCACCCTGCTCCCAGGCCCAACAGCCTCTTAATGACTGTGGCCAAGGACCAGTCCTGTCACCATCCA
GGGTGTTGGGCACTGAGAGCCCACCTCTGGCCCCGGAGCCCTTTGCCTATACATCCTGCACCACTGGTGA
AACCTCTCCCGTGAAGCTGAGGATGGGCTTTTCCCAAAACAAGGCCGTGAAGGTCAGAAGAAGAGTTAGT
GAGAAAGTCCCGAGGCTAGGGAAGCAGCTCCCTCCACAACCAGAGAGGCAGCGGGTCACAGAGCGGGACC
CCTCCAGGCCCCATCAGGGAGGTCTCAGCAGGAGGCCCACACTGGCCCGGGAGCCTCCTGGACGCTCCTG
CTCTGAGTCCACCCTCTACCCCGTGCCCTTCCTTGTCCCCGTAGTGGTGGCCCAGAGGGAAAGTTACCCA
ACGTCACCCCAAGCGTTCTTCCCAATGGAGGCAGCTCTCCTCAGCTCAGCAGCCAGGCGGAAGCAGCGCA
GGTGGCAGTCCACCATGGAGATCTCAGCCAAAGCCGGTTCAGTCAGCCAACCTGGGCCCAGCATGGGGCT
CCCTAGGTCCCCAGCCAAGAGAGGAAGTGGTCCCAGGGCCCAGAGTAGGCCCACACTTGCCCGTCAGGAT
GCCTGTGCGAGGTGTGAGTCGGACCCCTCGGAGCACTCTGCAGACTGCACCTCACTCTACCACTCCACCA
TTGCCGAGACCAGCGAGGACGAGGAGGCGAGTGACCACACTGCCAACCGCTTTGGGGACGAGTCCAGCAG
CAACGATTCAGAAGGGTGTTTCCGGGGCAGCCGCCGTCGCCTGGCAATAGGCAGTGCAGAGGCTGGGCAA
GGGGGGTGGGCCTGGCCTCGGGTGCCCCCCCAGCAGCCCTCACGGGCCCCAGGAAACACCAGGCCACCCT
TGCCCCCTGTGCCCAAACTGTGCCGCATCAAGGCCTCCAAGGCCCTGAAGAAGAAGATCCGAAGGTTTCA
GCCAGCAGCCCTGAAGGTCATGACCATGGTGTGA

Translation (757 aa):
MWAPSGQGPAGWDRRRVGARLRAALAGLQELQGLRATQQARVRGALGLHPAPGPRGQELRLEAALTALRE
QLSRLRRQDAGLKTHLDQLDQQISELQLDVSRSSCEALDSDSRPSSGFYELSDAGSCSLSTSCASVCSDR
LSPSLGSWLPVFQPSKSRSGIGDWRPRSADETTVPAWSPQLTEDSRLLHGAEGTGRLTGMFRPRPVSTGD
LERVLPADVGLQRAGTDAAHLLGQGIEIPAHALDPTYQRDLVARGGQEVYPYPSPLHAVALQSPLFALPK
EAPCFDICSPPQEPPLVPVDENRTQPEPIRELGSAEAYIHRLLHLRGQELPLRDVGQEQGGDTAAFPPKP
CGQRSESTCQLEKQACGADRGGLKLGRGAAKDSLKQHGPVSLVGAEPLSSPLKEETIPWNPCVHGDNTVG
SSPCSQAQQPLNDCGQGPVLSPSRVLGTESPPLAPEPFAYTSCTTGETSPVKLRMGFSQNKAVKVRRRVS
EKVPRLGKQLPPQPERQRVTERDPSRPHQGGLSRRPTLAREPPGRSCSESTLYPVPFLVPVVVAQRESYP
TSPQAFFPMEAALLSSAARRKQRRWQSTMEISAKAGSVSQPGPSMGLPRSPAKRGSGPRAQSRPTLARQD
ACARCESDPSEHSADCTSLYHSTIAETSEDEEASDHTANRFGDESSSNDSEGCFRGSRRRLAIGSAEAGQ
GGWAWPRVPPQQPSRAPGNTRPPLPPVPKLCRIKASKALKKKIRRFQPAALKVMTMV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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