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Report for CCDS14998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14998.1 Public Mus musculus 1 Cmklr2 23 108 98 CCDS HistoryNCBI Gene:241070Re-query CCDS DB by CCDS ID:14998.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14998.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050536.13 ENSMUSP00000051417.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050536.13Link to Ensembl Protein Viewer:ENSMUSP00000051417.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000050536Re-query CCDS DB by Protein ID:ENSMUSP00000051417
Original member NCBI NM_001357045.1 NP_001343974.1 Updated not alive Link to Nucleotide Sequence:NM_001357045.1Link to Protein Sequence:NP_001343974.1Re-query CCDS DB by Nucleotide ID:NM_001357045Re-query CCDS DB by Protein ID:NP_001343974
Current member NCBI NM_001357045.2 NP_001343974.1 Accepted alive Link to Nucleotide Sequence:NM_001357045.2Link to Protein Sequence:NP_001343974.1Re-query CCDS DB by Nucleotide ID:NM_001357045Re-query CCDS DB by Protein ID:NP_001343974Link to BLAST:NP_001343974.1
Original member NCBI NM_146250.2 NP_666362.1 Updated not alive Link to Nucleotide Sequence:NM_146250.2Link to Protein Sequence:NP_666362.1Re-query CCDS DB by Nucleotide ID:NM_146250Re-query CCDS DB by Protein ID:NP_666362
Current member NCBI NM_146250.3 NP_666362.1 Accepted alive Link to Nucleotide Sequence:NM_146250.3Link to Protein Sequence:NP_666362.1Re-query CCDS DB by Nucleotide ID:NM_146250Re-query CCDS DB by Protein ID:NP_666362Link to BLAST:NP_666362.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001343974.1 353 Q8K087 353 100% 0 0
NP_666362.1 353 Q8K087 353 100% 0 0

Chromosomal Locations for CCDS 14998.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 63183013 63184074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGAAGTCTCAAAGGAAATGTTATTTGAGGAGTTGGACAACTATTCCTATGCCTTAGATTATTACTCCC
AGGAGTCTGACCCGGAGGAGAAGGTGTACCTGGGACTCGTTCACTGGATCTCCCTGTTCTTATATGCCCT
AGCATTTGTTCTGGGCATCCCAGGAAATGCCATCGTCATTTGGCTCATGGGATTCAAGTGGAAGAAGACA
GTCACCACTCTTTGGTTCCTCAATCTGGCCATCGCAGACTTCATCTTTGTTCTCTTCCTGCCCCTGTACA
TTTCCTACGTGGCCTTGAGTTTCCACTGGCCCTTTGGCCTGTGGCTCTGCAAGGTTAATTCCTTCATTGC
CCAACTGAACATGTTTTCCAGTGTTTTCTTCTTGACAGTGATCAGCCTGGACCGCTACATCCACTTGCTC
CATCCTGGCTTGTCTCATCGGCACCGGACTCTAAAGAGCTCACTGGTTGTTGTTATACTTGTCTGGCTGT
TGGCTTCTCTGCTTGGAGGTCCTACCTTATACTTCCGGGACACCATGGAGGTCAACAACCACATCATTTG
TTATAATAATTTCCAGGAGCATGAACTCACCTTGATGAGACACCATGTTCTGACCTGGGTGAAGTTCCTC
TTTGGCTACCTCTTCCCTTTGCTAACCATGAGCTCCTGCTACTTGTGCCTCATCTTCAAGATGAAAAAGC
GGAACATCCTGATATCTAGAAAGCATCTCTGGATGATCCTGTCTGTGGTCATTGCCTTCTTGGTTTGCTG
GACCCCTTATCACCTGTTTAGCATCTGGGAGCTCAGCATTCATCACAACAGCTCTTTCCAGAATGTGCTG
CAGGGTGGAATCCCCCTCTCAACTGGCTTAGCCTTCCTCAATAGCTGCTTGAATCCCATCCTTTACGTCC
TAATAAGCAAGACGTTCCAAGCCCGCTTCAGGGCCTCTGTTGCTGAGGTACTAAAGCGTTCGCTGTGGGA
AGCCAGCTGCTCTGGTACAGTCAGTGAACAACTCAGGAGTGCTGAAACCAAGAGCCTGTCTCTCCTAGAA
ACTGCCCAGTGA

Translation (353 aa):
MEVSKEMLFEELDNYSYALDYYSQESDPEEKVYLGLVHWISLFLYALAFVLGIPGNAIVIWLMGFKWKKT
VTTLWFLNLAIADFIFVLFLPLYISYVALSFHWPFGLWLCKVNSFIAQLNMFSSVFFLTVISLDRYIHLL
HPGLSHRHRTLKSSLVVVILVWLLASLLGGPTLYFRDTMEVNNHIICYNNFQEHELTLMRHHVLTWVKFL
FGYLFPLLTMSSCYLCLIFKMKKRNILISRKHLWMILSVVIAFLVCWTPYHLFSIWELSIHHNSSFQNVL
QGGIPLSTGLAFLNSCLNPILYVLISKTFQARFRASVAEVLKRSLWEASCSGTVSEQLRSAETKSLSLLE
TAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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