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Report for CCDS15073.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15073.1 Public Mus musculus 1 Asic4 23 108 98 CCDS HistoryNCBI Gene:241118Re-query CCDS DB by CCDS ID:15073.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15073.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037708.9 ENSMUSP00000045598.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037708.9Link to Ensembl Protein Viewer:ENSMUSP00000045598.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000037708Re-query CCDS DB by Protein ID:ENSMUSP00000045598
Original member Current member NCBI NM_183022.3 NP_898843.1 Accepted alive Link to Nucleotide Sequence:NM_183022.3Link to Protein Sequence:NP_898843.1Re-query CCDS DB by Nucleotide ID:NM_183022Re-query CCDS DB by Protein ID:NP_898843Link to BLAST:NP_898843.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898843.1 539 Q7TNS7 539 100% 0 0

Chromosomal Locations for CCDS 15073.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 75450832 75451413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75469111 75469255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75469357 75469484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75469671 75469833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75470279 75470335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75472284 75472437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75472822 75472913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75472992 75473071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75473243 75473347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75473519 75473632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGCCGATCGAGATTGTGTGCAAAATCAAATTTGCTGAGGAGGATGCAAAACCCAAGGAGAAGGAGGCAG
GGGATGAACAGAGCCTCCTGGGGGCTGCTCAGGGGCCAGCAGCCCCTCGGGACCTGGCCACCTTTGCCAG
CACCAGCACTCTGCATGGGCTGGGCCGGGCCTGTGGCCCTGGCCCCCATGGACTGCGCAGAACCCTGTGG
GCACTGGCCCTACTCACCTCACTGGCTGCCTTTCTGTACCAGGCAGCCAGCCTGGCCAGGGGCTACCTGA
CCCGGCCTCACCTGGTAGCCATGGACCCTGCTGCCCCAGCCCCAGTGGCGGGTTTTCCGGCTGTCACCCT
CTGCAACATCAACCGCTTCCGGCACTCGGCACTCAGCGATGCTGATATCTTCCACCTGGCCAATCTGACA
GGGCTGCCCCCCAAAGACCGGGACGGGCACCGTGCAGCTGGCCTTCGCTATCCAGAGCCTGACATGGTAG
ACATCCTCAACCGCACTGGCCACCAGCTTGCTGACATGCTCAAGAGCTGCAACTTCAGTGGGCACCACTG
CTCCGCCAGCAACTTCTCTGTGGTCTATACTCGCTATGGGAAGTGTTACACCTTTAATGCAGATCCTCAG
AGTTCACTGCCCAGTAGGGCAGGCGGCATGGGTAGTGGCCTGGAGATCATGCTAGACATCCAGCAGGAGG
AATACCTACCCATATGGAGGGAGACAAACGAGACGTCATTCGAGGCAGGGATCCGGGTGCAGATCCACAG
CCAGGAGGAGCCGCCCTACATCCACCAGCTGGGGTTTGGCGTGTCCCCAGGCTTCCAGACTTTTGTGTCC
TGCCAGGAACAGCGGCTAACTTATCTGCCCCAGCCTTGGGGCAACTGCCGGGCGGAAAGCGAGCTCAGGG
AGCCTGAGCTTCAGGGCTACTCAGCCTATAGTGTGTCTGCCTGCCGACTGCGCTGTGAGAAGGAGGCCGT
GCTTCAGCGCTGCCACTGCCGGATGGTGCACATGCCAGGCAACGAGACCATCTGCCCACCAAATATCTAC
ATTGAATGTGCCGACCACACACTGGACTCCCTTGGTGGGGGCTCCGAGGGCCCATGCTTCTGCCCTACAC
CCTGCAACCTGACTCGTTACGGCAAAGAGATCTCCATGGTCAAGATCCCCAACAGGGGCTCAGCCAGATA
CCTGGCAAGGAAGTACAACCGCAATGAGACCTATATAAGGGAGAACTTCTTGGTCCTGGATGTCTTTTTC
GAAGCCCTAACTTCTGAAGCCATGGAACAGCAAGCCGCCTATGGCCTGTCAGCCCTGCTGGGGGACCTTG
GGGGACAGATGGGCCTGTTCATTGGGGCTAGCATCCTCACCTTGCTGGAGATCCTTGACTACATCTATGA
GGTCTCCTGGGATCGGCTCAAGAGGGTGTGGCGACGGCCCAAGACCCCACTGCGGACATCCACCGGGGGC
ATCTCCACTCTGGGGCTGCAGGAGCTGAAGGAACAGAGTCCCTGTCCAAGCCGGGGCCGTGCTGAGGGTG
GGGGGGCTAGCAGCCTGCTTCCCAACCATCACCACCCTCACGGCCCCCCAGGAAGCCTCTTTGAAGACTT
TGCTTGCTAG

Translation (539 aa):
MPIEIVCKIKFAEEDAKPKEKEAGDEQSLLGAAQGPAAPRDLATFASTSTLHGLGRACGPGPHGLRRTLW
ALALLTSLAAFLYQAASLARGYLTRPHLVAMDPAAPAPVAGFPAVTLCNINRFRHSALSDADIFHLANLT
GLPPKDRDGHRAAGLRYPEPDMVDILNRTGHQLADMLKSCNFSGHHCSASNFSVVYTRYGKCYTFNADPQ
SSLPSRAGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEEPPYIHQLGFGVSPGFQTFVS
CQEQRLTYLPQPWGNCRAESELREPELQGYSAYSVSACRLRCEKEAVLQRCHCRMVHMPGNETICPPNIY
IECADHTLDSLGGGSEGPCFCPTPCNLTRYGKEISMVKIPNRGSARYLARKYNRNETYIRENFLVLDVFF
EALTSEAMEQQAAYGLSALLGDLGGQMGLFIGASILTLLEILDYIYEVSWDRLKRVWRRPKTPLRTSTGG
ISTLGLQELKEQSPCPSRGRAEGGGASSLLPNHHHPHGPPGSLFEDFAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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