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Report for CCDS49689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49689.1 Public Mus musculus 15 Ribc2 23 108 98 CCDS HistoryNCBI Gene:67747Re-query CCDS DB by CCDS ID:49689.1Re-query CCDS DB by GeneID:67747See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49689.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023067.3 ENSMUSP00000023067.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023067.3Link to Ensembl Protein Viewer:ENSMUSP00000023067.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000023067Re-query CCDS DB by Protein ID:ENSMUSP00000023067
Original member Current member NCBI NM_026357.2 NP_080633.2 Accepted alive Link to Nucleotide Sequence:NM_026357.2Link to Protein Sequence:NP_080633.2Re-query CCDS DB by Nucleotide ID:NM_026357Re-query CCDS DB by Protein ID:NP_080633Link to BLAST:NP_080633.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080633.2 377 Q9D4Q1 377 100% 0 0

Chromosomal Locations for CCDS 49689.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 85132267 85132380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85132877 85132958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85135215 85135559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85137947 85138065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85141485 85141712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85143208 85143374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 85144141 85144219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGGAGGTAGCGATGTCTAAGGACCTACAACAGGAGGCCAACCTAGCCAAGAAGCGGTACATTGACCTGT
GCAGGCAGGGACGGATCTTCGACGCCAGGAACAGGATCATTGGGGGAGACACACAAGCCTGGGATTTTCA
AGTCCGTGACCAGAAGATAAAAGAAATAACTGACAAAGCTAGGCATGAAGCCTTTGCTGCTGAAATGAAG
CACAATGACAAAGTCATGTGCATGGCGCATGACCGGGAACAGAGGCACAGGAAACAGCTGTGTAGAGCTA
TCAATGACTTCCAGCAGAACTTTCAGAAGCCAGAAACTCGACGTGAGTTTGATCTTTCTGACCCCCTGGC
CCTCCAGAAAGAGCTTCCAGCCCGCATTTCAGACAATGACATGCGGAACACCATATCAGGAATGCAGAAG
TTCATGGGAGAGGATTTAAACTTCCAAGAGAGGAGGAGGTTCCAAAAGGAACAGAGCAGAGAATGGTTTC
TGCAGCAGCATGGGGAACGGGAGAAAGCCCGGGCTGACCACCTACTGGCAGAACACCTCCACACTCAGAC
GAGACTCAAGTTTGATGAAACAGCCAGAGAGTTGATGAAGCTGGAAGGCTCCACCAGGAAGGAAGTCTGC
GCAGCCGTGAAAGCGTTCAACAAGAATCAGGTTGTGGAGTTGACAGAAAGAAAGAGGCAAGAGAAGCAAC
AAGAACAAGAAGACAACATGACCGAGATCACCAACCTGCTGCATGGAGACCTGCTTTCTGAGAACCCTCG
ACCGGTGGCCAGCTCCTTTGGGTCTCACCGTGTGGTCCTTGACCGCTGGAAGGGCATGAACCGAGAGCAG
CTGGAGGAGATCTGGTTCACGCAGAAGCGGCAAATCCAGGAGAAGCTGAGGCTTCAGGAGGAAGAGCGCC
AGCACAGCATGGACTGGGATTTGCGCAGGATCCGGAAGGCTCATGCCAGCCTGCTGCATGAGCGGCAGCA
GCAGCGCTTGCTTCGGGAGCAGCGCAGGGCCCTGGACTGCAGCAACCTCAACCTGGCCAGGCAGCAGTAC
TTACAGAAAAAACAAATGAATACAGCCTCCTCAAGTCAGCCCACAGAAGACTATTTCTCACAGTTTAATA
CAAGGAGCCGCTGA

Translation (377 aa):
MEVAMSKDLQQEANLAKKRYIDLCRQGRIFDARNRIIGGDTQAWDFQVRDQKIKEITDKARHEAFAAEMK
HNDKVMCMAHDREQRHRKQLCRAINDFQQNFQKPETRREFDLSDPLALQKELPARISDNDMRNTISGMQK
FMGEDLNFQERRRFQKEQSREWFLQQHGEREKARADHLLAEHLHTQTRLKFDETARELMKLEGSTRKEVC
AAVKAFNKNQVVELTERKRQEKQQEQEDNMTEITNLLHGDLLSENPRPVASSFGSHRVVLDRWKGMNREQ
LEEIWFTQKRQIQEKLRLQEEERQHSMDWDLRRIRKAHASLLHERQQQRLLREQRRALDCSNLNLARQQY
LQKKQMNTASSSQPTEDYFSQFNTRSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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