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Report for CCDS22311.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22311.1 Public Mus musculus 8 Adam29 23 108 98 CCDS HistoryNCBI Gene:244486Re-query CCDS DB by CCDS ID:22311.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22311.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053441.4 ENSMUSP00000054292.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053441.4Link to Ensembl Protein Viewer:ENSMUSP00000054292.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000053441Re-query CCDS DB by Protein ID:ENSMUSP00000054292
Original member Current member NCBI NM_175939.3 NP_787953.2 Accepted alive Link to Nucleotide Sequence:NM_175939.3Link to Protein Sequence:NP_787953.2Re-query CCDS DB by Nucleotide ID:NM_175939Re-query CCDS DB by Protein ID:NP_787953Link to BLAST:NP_787953.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_787953.2 763 Q811Q4 763 99.8689% 0 1

Chromosomal Locations for CCDS 22311.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 55871126 55873417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2292 nt):
ATGAATATGATTGAAGCATTATTATCCATGAGAGTCTTGTTCCTGACACAAGTGTTTGGGATTTTCCTGT
GTTTTCCTGGACTCACAAAGGCTGGACATCTGCACTACCACAGTTCCATAGAAGTGGTGATTCCCATGAA
GGTAACTGAGAAAACCAGAGGAATGAACCTTCCAAATTGGATCTCCTATAGCCTTAAACTTGGAGGCCAG
AGATACATCATCCACATGAAGATCAAGAATCTTTTTCTAACCAGGCACCTTCCAGTGTTCACCTACTCTG
ATCAGGACTCTCTGCTTGAAGATTACCCTTTTGTACAGGATGACTGCTACTACCAAGGTTATGTGGAGGG
TGACTCAGAATCATTAGTTTCCCTCAGTTCCTGTTTTGGAGGCTTTCATGGACTATTAGAGATAAATAAT
ATTGTTTATGAAATTATGCCCAAGAAGTTTTCTAGGAAATTTGAACATCTGGTCTATAAAGTGGACAGTA
ATAAAACAGAATCAAGGGGTTCCAGCCTTATGCAAGATAACATAACATGCCAAGTAGAGTTACAAAAAAG
TGGTAATCCCATTCTCAAGCAAAGTAGTTTTGAAGACTGGTGGACCCATACTAAAATTGTTGAATTAGTA
GTGGTGGTGGATAAGACTCTATATGACCACTATGGAAATTATACAGTAATGCTGTCAGATCTGTATTCTG
TGATAAATATAGTGGATACCATTTATGAGGTAATTGGTATTAAAATATTATTGGTTGGTGTGGAGGTTTG
GAATAAGAAAAATCTTATTGTGATAGATGACGTAAGTAAATCTCTAAGACTATATTGCCGGTGGAAAGCC
TCAAACTTTCTTCATCGTTTAAAACATGATGTCTCGCATCTTTTCATATATAGGCACTTGAGAGGATTAA
GTGGCATAGGTTCCACTGGGGGGATTTGTGATCCAAAACGTAGTTGTGCAGTTGTTACTTTCATAGACAG
AACTTTGAACCTTCGTGCCATTGGAGTGGCTCATCACTTAGGTCATAATTTGGGCATGAAACATGATGAA
GATATATGTAAGTGTAGTTACAGTAAATGTATAATGCACATGGACAGCCCACCGATACCCAAATTCAGCA
ATTGTAGCTATAATTACTTTTGGTCTTACACTGTAAAGAACACAAGGTGTTTGATGGAAAACATGTACAC
AAAGGATATCTTTGACAGGACACGCTGTGGAAATGGTGTTGTTGAAGACAAAGAACAATGTGACTGTGGA
TCATTAAGGAATTGTACAAATGACCTTTGTTGCATGTCAAACTGCACTCTGAGTACTGGGTCTTCCTGTG
CCTTTGGACTTTGCTGCAAAAACTGTCAGTTTTTACCATCAGGGACTCTGTGTAGAAAAAGGGATAACAT
TTGTGACCTTCCAGAGTGGTGCAATGGGACGTCCCATGAATGTCCAGATGATGCTTATGTAGAAGATGGA
ATTCCCTGTGGGGTCTCAGCCTATTGCTATGAAAAGCAATGTAATGACCGCAATGAGCACTGTAGGCAAA
TTTTTGGCCAGAATGCAAAGACTGCAAGTGTACATTGCTACAGAGAAATAAACACTAAAGGTGATCGTTT
TGGCCATTGTGGTCTTCAGGGACCTACTTACATAAAATGTAAAAGCAATGATGCTCTTTGTGGAAGAATT
CAATGTGATAATGTGGTACAAATTCCCAATATGAAAGATCACAGTACTATTCACTTTGCTCTTGTCAAAA
ATGTATCTTGCTGGGGCACTGATTACCACACTGGGACAAGCCTAACTGATATAGGCGATGTGAAAGATGG
CACAGAGTGTGAGCAAAATCATATCTGTATCAATAGGCATTGTGTACATATATCTACATTAGACAGCAAC
TGTACACCTGCATTCTGTAATTACAGGGGCATCTGTAACAATAAACATCACTGCCACTGCAACTTCCACT
GGGATCCTCCTAACTGTATGATTAGAGGACATGGAGGTAGTGTAGACAGTGGCTTACCTCCTAAAACAAA
TAAAAAGAAACATTTCTTCTATCTGCTTCTATTACAGCTCATTATTTTGGCTTGCCTTTTAAGTTGTCTT
CTTTGGCTACTTTTTAATATAAAAGGAAGTAAACGAAAGCCCCAAGTTCAGCCTACACCTGTAAAAACAA
AGAAAGTTTCAAAGAAAGTTCCAAGCCAAAAACCGAGTCCAGTGCCTTCCCCGAGTCTACCTCAATTAAG
AATGCCATCACGATCTGCTTCACCAACATCATCCATAAAAAGTACCAATTAA

Translation (763 aa):
MNMIEALLSMRVLFLTQVFGIFLCFPGLTKAGHLHYHSSIEVVIPMKVTEKTRGMNLPNWISYSLKLGGQ
RYIIHMKIKNLFLTRHLPVFTYSDQDSLLEDYPFVQDDCYYQGYVEGDSESLVSLSSCFGGFHGLLEINN
IVYEIMPKKFSRKFEHLVYKVDSNKTESRGSSLMQDNITCQVELQKSGNPILKQSSFEDWWTHTKIVELV
VVVDKTLYDHYGNYTVMLSDLYSVINIVDTIYEVIGIKILLVGVEVWNKKNLIVIDDVSKSLRLYCRWKA
SNFLHRLKHDVSHLFIYRHLRGLSGIGSTGGICDPKRSCAVVTFIDRTLNLRAIGVAHHLGHNLGMKHDE
DICKCSYSKCIMHMDSPPIPKFSNCSYNYFWSYTVKNTRCLMENMYTKDIFDRTRCGNGVVEDKEQCDCG
SLRNCTNDLCCMSNCTLSTGSSCAFGLCCKNCQFLPSGTLCRKRDNICDLPEWCNGTSHECPDDAYVEDG
IPCGVSAYCYEKQCNDRNEHCRQIFGQNAKTASVHCYREINTKGDRFGHCGLQGPTYIKCKSNDALCGRI
QCDNVVQIPNMKDHSTIHFALVKNVSCWGTDYHTGTSLTDIGDVKDGTECEQNHICINRHCVHISTLDSN
CTPAFCNYRGICNNKHHCHCNFHWDPPNCMIRGHGGSVDSGLPPKTNKKKHFFYLLLLQLIILACLLSCL
LWLLFNIKGSKRKPQVQPTPVKTKKVSKKVPSQKPSPVPSPSLPQLRMPSRSASPTSSIKSTN


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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