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Report for CCDS22526.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22526.1 Public Mus musculus 8 Ces1a 23 108 98 CCDS HistoryNCBI Gene:244595Re-query CCDS DB by CCDS ID:22526.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22526.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095211.4 ENSMUSP00000092836.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095211.4Link to Ensembl Protein Viewer:ENSMUSP00000092836.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000095211Re-query CCDS DB by Protein ID:ENSMUSP00000092836
Original member Current member NCBI NM_001013764.2 NP_001013786.2 Accepted alive Link to Nucleotide Sequence:NM_001013764.2Link to Protein Sequence:NP_001013786.2Re-query CCDS DB by Nucleotide ID:NM_001013764Re-query CCDS DB by Protein ID:NP_001013786Link to BLAST:NP_001013786.2

Chromosomal Locations for CCDS 22526.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 93020418 93020595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93020888 93020960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93022341 93022472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93025196 93025343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93025567 93025647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93027294 93027434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93031065 93031103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93032607 93032711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93033928 93034032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93035952 93036105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93039449 93039582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93041963 93042107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93044911 93045115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 93048057 93048108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1692 nt):
ATGTGGCTCTTTGCTCTGGCCCTGGCTTCCCTCAACACTTGCATGGCTTTGGGGCACCTGTCCTCACCAC
CTGTGGTAGACACCCTGCAAGGCAAAGTCATGGGGAAGTACATCAGCTTAGAAGGATCCGCACAGCCTGT
AGCCGTCTTCCTGGGAGTCCCCTTTGCCAAGCCCCCTCTTGGGCCCCTGAGGTTTGCTCCACCACAGCCT
GCCGAGACCTGGAGCTCCGTGAAGAACACCACCTCCTACCCTCCTATGTGCTCGCAAATTACAGGAGTGG
GGCCAGTGCTCTCCGATGTCTTTACTAACCAACTAGAAAATGTTCCTCTTGAGTATTCTGAAGACTGCCT
TTACCTAAATATTTACTCCCCTACAGACCTGACAAGCAAAGACAGGCTGCCGGTGATGGTATGGGTCCAT
GGAGGCGGTTTACTCTCTGGTGGAGCATCAACTTTTGATGGACTGGCCCTGTCTACCCATGAAAACGTAG
TGATAGTAGTCATTCAATACCGTCTGGGCATCTGGGGTTTCCTCAGCACAGGAGATGAACACAGCCGAGG
GAACTGGGGTCACTTGGACCAGGTGGCTGCACTGCAGTGGGTCCAGAACAACATTGCTAACTTTGGAGGG
GACCCAAGCTCTGTGACCCTCTTTGGCGAGTCAGCAGGAGGTGAAAGTGTCTCTGTCCTTGTTTTATCTC
CGCTGACCAAGAACCTCTTCCAGAGGGCCATTTCTGAGAGTGGTGTGGCCCTCACGCCATGTCTGTTCAG
GGAGACTACAAGGCGTGCGGCTGAGCAAGTTGCCATTGCTACGGGGTGTGTGGCCACTACATCAGCCGAC
ATAGTGCACTGTCTACGTGAGAAGACAGAGGAGGAACTCTTGGCAACGACCCTGAAGATGAAATTCTTTG
CTCTTGATTTGCTTGGAGACCCCAGAGAGAGCTACCCTTTCCTGACCACCGTGATTGATGGAGTGGTGCT
GCCAAAGGCACCTGAAGAGATCCTGGCTGAGAAGAGTTTCAACACTGTCCCCTACATAGTGGGCATCAAC
AAGCAAGAGTTTGGCTGGTTTATTCCAATGATGATGGGCTATCCACTCTCTGAAGGCAAACTGGACCAGA
AGTCAGCCACATCTCTCCTGTGGAAGTCCTACCCACTTACTAACATCTCTAAGGAACTGACTCCAGTGGC
CACTGAGAAGTATTTGGGAGGATCAGACTGCCCTGACAAAAAGAAAGACCTCTTTTTAGACATGATGGGA
GATGTGTTATTTGCTGTGCCATCTGTGATTGTGGCTCGCTATCACAGAGATGCTGGAGCCCCCACCTACA
TGTATGAGTTTAAGTATCACCCAAGCTTTGTGTCCGACATGAGACCCAAGACGGTAATAGCAGACCATGG
AGATGAAGTTTACTCCGTTTGGGGGACACCATTTTTAAAAGAGGGTGCCTCAGAGGAGGAGATCAACCTC
AGCACCATGATGATGAAGTTTTGGGGCAATTTTGCTCGAAATGGGAACCCAAATGGGGAAGGACTGCCAC
ACTGGCCAGAGTATGGCGAGAAGGAAAGTTACCTTCAGATCGGAGCCACCACCCAGCAAGCCCAGAGGCT
CAAAGACAAGGAAGTAGCTTTCTGGACCAGCCTCCGGGCCATGGAGGTGGGAGAAGCAACCAAGGGAGAC
ACTCAGAGATGA

Translation (563 aa):
MWLFALALASLNTCMALGHLSSPPVVDTLQGKVMGKYISLEGSAQPVAVFLGVPFAKPPLGPLRFAPPQP
AETWSSVKNTTSYPPMCSQITGVGPVLSDVFTNQLENVPLEYSEDCLYLNIYSPTDLTSKDRLPVMVWVH
GGGLLSGGASTFDGLALSTHENVVIVVIQYRLGIWGFLSTGDEHSRGNWGHLDQVAALQWVQNNIANFGG
DPSSVTLFGESAGGESVSVLVLSPLTKNLFQRAISESGVALTPCLFRETTRRAAEQVAIATGCVATTSAD
IVHCLREKTEEELLATTLKMKFFALDLLGDPRESYPFLTTVIDGVVLPKAPEEILAEKSFNTVPYIVGIN
KQEFGWFIPMMMGYPLSEGKLDQKSATSLLWKSYPLTNISKELTPVATEKYLGGSDCPDKKKDLFLDMMG
DVLFAVPSVIVARYHRDAGAPTYMYEFKYHPSFVSDMRPKTVIADHGDEVYSVWGTPFLKEGASEEEINL
STMMMKFWGNFARNGNPNGEGLPHWPEYGEKESYLQIGATTQQAQRLKDKEVAFWTSLRAMEVGEATKGD
TQR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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