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Report for CCDS40616.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40616.1 Public Mus musculus 9 Ankk1 23 108 98 CCDS HistoryNCBI Gene:244859Re-query CCDS DB by CCDS ID:40616.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40616.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034792.6 ENSMUSP00000034792.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034792.6Link to Ensembl Protein Viewer:ENSMUSP00000034792.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000034792Re-query CCDS DB by Protein ID:ENSMUSP00000034792
Original member NCBI NM_172922.3 NP_766510.1 Updated not alive Link to Nucleotide Sequence:NM_172922.3Link to Protein Sequence:NP_766510.1Re-query CCDS DB by Nucleotide ID:NM_172922Re-query CCDS DB by Protein ID:NP_766510
Current member NCBI NM_172922.4 NP_766510.1 Accepted alive Link to Nucleotide Sequence:NM_172922.4Link to Protein Sequence:NP_766510.1Re-query CCDS DB by Nucleotide ID:NM_172922Re-query CCDS DB by Protein ID:NP_766510Link to BLAST:NP_766510.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766510.1 745 Q8BZ25 745 100% 0 0

Chromosomal Locations for CCDS 40616.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 49415640 49416847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49418043 49418079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49418661 49418779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49419366 49419521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49419991 49420040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49420325 49420476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49421667 49421961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 49426771 49426991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2238 nt):
ATGGTGCCACACAGAGCCAGGAGGCTTCTGAACCCCATGGCAGTCGGTCCCTTGGCGCAGCAGCTGGGCA
GCCTCACCGTCTTCACGAGGGATGATTTTGAGGAAGAATGGCACCTAGTAGCCAGTGGTGGCTTCAGCAA
GGTGTTCCAGGCGAGGCACAAGCGCTGGAGGACCCAGTACGCCATCAAGTGCTCCCCGTGCCTCCAGAAG
GAAACCACCAGCTCTGAGGTGACCTGCCTCTTTGAAGAAGCAGTCAAAATGGAGAAGATTAAGTTTCAAC
ACATCGTGTCCATCTATGGGGTCTGTAAGCAGCCCCTGGGCATTGTGATGGAGTTCATGGCCAGTGGTTC
CCTGGAGAAGACACTACCTACCCACAGCCTCTGCTGGCCACTCAAGCTCCGCATCATCCATGAGACCAGC
TTGGCCATGAACTTCCTCCACAGCATTAAGCCACCCCTGCTCCACCTGGACCTTAAGCCAGGCAACATCC
TGCTGGACAACAACATGCATGTCAAGATTTCCGATTTTGGCCTGTCCAAGTGGATGGAGCAGTCAACTCA
GAAGCAGTACATTGAGAGATCAGCTCTGAGGGGGACACTCAGCTACATCCCTCCTGAAATGTTCCTGGAG
AATAACAAGGCTCCGGGGCCTGAATATGATGTGTACAGCTTTGCAATTGTCATCTGGGAGATTCTCACTC
AGAAGAAACCCTATGCAGGGCTCAATATGATGACTATTATCATCCGGGTAGCTGCAGGCATGAGGCCCTC
CTTGCAGGATGTCTCTGATGAGTGGCCAGAGGAGGTACATCAAATGGTGAACCTGATGAAGCGCTGTTGG
GACCAAGACCCCAAGAAGAGGCCATGTTTCCTAAATGTGGCCGTCGAGACAGACATGCTACTGTCCCTGT
TCCAGAGCCCCATGACAGACCCTGGGTGTGAAGCCCTGACCCAGAAGGTGTCTTGCAAGCCATCGCTGAG
CCAACCCCACAAGGTCAGCAAGGAGGTCAACCAGGAGATTGCAGACAGTGTCTCAAGTGACTCCTTGAAG
TGGATCCTACAGCTCTCTGACAGCAAGAGCTTGGTCGCAAGTGATGTCTACGAGAATAGGGTGACTCCCC
TACACTTTCTAGTGGCCGGAGGCAGCTTGGAACAGGTGAGGCTGCTGCTGTCCCACGACGTTGATGTAGA
TTGCCAGACAGCCTCTGGCTATACGCCACTCCTCATTGCCACCCAGGACCAGCAGCCTGACCTCTGTGCC
CTGCTCCTGGCACATGGTGCTGATACCAACCTGGCAGACGAAGATGGCTGGGCCCCACTGCATTTTGCAG
CCCAGAATGGGGATGACCACACTGCCCGTCTGCTCCTGGACCACGGGGCCCTGGTGAATGCACGGGAGCA
CGAGGGCTGGACCCCACTCCACCTGGCTGCACAGAACAACTTTGAGAATGTGGCACGGCTTCTGGTCTCC
CGTCAGGCTGACCTCAGCCCACACGAGGCTGAAGGCAAGACTCCCCTTCATGTTGCAGCCTACTTTGGTC
ACATTGGCTTGGTCAAGCTTCTGTCAGGACAGGGAGCAGAGCTGGATGCTCAGCAGAGAAACCTGAGGAC
ACCCCTGCACCTAGCAGTGGAGAGGGGGAAAGTGAGAGCCATTCAGCACCTGCTAAAATGTGGGGCACTC
CCTGATGCCCTTGACCACAGCGGCTACAGCCCTTTGCACATTGCTGCAGCCAGGGGCAAGGACCTTATCT
TTAAGATGCTTCTCAGATATGGAGCCAGCCTTGAGCTACGCACACAACAGGGATGGACACCCCTGCACCT
AGCCACTTACAAGGGTCACCTGGAGATCATCCATCAGTTGGCCAAGAGCCATGTAGACCTAGATGCTCTT
GGAAGTATGCAATGGACTCCCCTGCACCTGGCTGCCTTCCAAGGGGAGGAGGGGGTGATGCTGGCACTGC
TACAGTGTGGGGCCAACCCCAATGCTGCTGAGCAGTCAGGCTGGACTCCTCTCCATCTGGCAGTGCATAA
AGGAACCTTCCTGGGCATCACCCACCTTCTGGAGTATGGTGCTGACATCCATGCTTGCAACAAGGTGGGC
TGGACACCTGCCCACCTGGCTGCTCTCAAGGGCAACACAGCCATCCTCAAAGTTCTAGTTAAAGCTGCTG
CACAGGTGGATGTCAAGGGTGGAGTTAGCTGCACACCCCTGCAGCTGGCCATCCACAGCCCAAAGTAG

Translation (745 aa):
MVPHRARRLLNPMAVGPLAQQLGSLTVFTRDDFEEEWHLVASGGFSKVFQARHKRWRTQYAIKCSPCLQK
ETTSSEVTCLFEEAVKMEKIKFQHIVSIYGVCKQPLGIVMEFMASGSLEKTLPTHSLCWPLKLRIIHETS
LAMNFLHSIKPPLLHLDLKPGNILLDNNMHVKISDFGLSKWMEQSTQKQYIERSALRGTLSYIPPEMFLE
NNKAPGPEYDVYSFAIVIWEILTQKKPYAGLNMMTIIIRVAAGMRPSLQDVSDEWPEEVHQMVNLMKRCW
DQDPKKRPCFLNVAVETDMLLSLFQSPMTDPGCEALTQKVSCKPSLSQPHKVSKEVNQEIADSVSSDSLK
WILQLSDSKSLVASDVYENRVTPLHFLVAGGSLEQVRLLLSHDVDVDCQTASGYTPLLIATQDQQPDLCA
LLLAHGADTNLADEDGWAPLHFAAQNGDDHTARLLLDHGALVNAREHEGWTPLHLAAQNNFENVARLLVS
RQADLSPHEAEGKTPLHVAAYFGHIGLVKLLSGQGAELDAQQRNLRTPLHLAVERGKVRAIQHLLKCGAL
PDALDHSGYSPLHIAAARGKDLIFKMLLRYGASLELRTQQGWTPLHLATYKGHLEIIHQLAKSHVDLDAL
GSMQWTPLHLAAFQGEEGVMLALLQCGANPNAAEQSGWTPLHLAVHKGTFLGITHLLEYGADIHACNKVG
WTPAHLAALKGNTAILKVLVKAAAQVDVKGGVSCTPLQLAIHSPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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