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Report for CCDS14908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14908.1 Public Mus musculus 1 Creg2 23 108 98 CCDS HistoryNCBI Gene:263764Re-query CCDS DB by CCDS ID:14908.1Re-query CCDS DB by GeneID:263764See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14908.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053355.5 ENSMUSP00000052871.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053355.5Link to Ensembl Protein Viewer:ENSMUSP00000052871.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000053355Re-query CCDS DB by Protein ID:ENSMUSP00000052871
Original member Current member NCBI NM_170597.4 NP_733485.1 Accepted alive Link to Nucleotide Sequence:NM_170597.4Link to Protein Sequence:NP_733485.1Re-query CCDS DB by Nucleotide ID:NM_170597Re-query CCDS DB by Protein ID:NP_733485Link to BLAST:NP_733485.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733485.1 288 Q8BGC9 288 100% 0 0

Chromosomal Locations for CCDS 14908.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 39623096 39623243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39624870 39624983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39647776 39647945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39650506 39650940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGTCGCTGTCCGGCAGGGAGCGTCCTGCTTGGCCAGGGAGTCGCCTGTCCTGGTTGCTATGCTGCAGCG
CCCTGTTGTCCCCAGCCGCCGGCTACGTGATCGTGAGCTCCGTGTCCTGGGCTGTCACCAACGAGGTAGA
TGAGGAGCTGGACAGTGCATCCACTGAGGAGGCGCTGCCCGCGCTGCTGGAGGACTCGAGTAGCATCTGG
CAGCAGAGCTTTCCGGCCTCGGCGCACAAGGAGGACACGCACCTGCGACCTCGGGGCTCCGCCCGCGCCA
GGCCCGCACCGGCCGCGCGTGGCATGTTCTCCTACCGGCGGGAGAGCGGCTCATCTGAGGCATCCCCTGG
CCCCAGGGTGCATGCCGGCACCGCCCGCTCCCTAGCCCACGCTAGCTCCTGGGGCTGTCTGGCCACTGTG
TCCACCCACGAAAAGATCCAAGGACTGCCCTTTGGGAGCTGCCTGGCCATCAGTGATGGCCCCGTCCACA
ACAGCACAGGGATCCCTTTCTTCTACATGACAGCCAAGGACCCTGCGGTGGCTGACCTGGTGAAGAATCC
CACAGCCTCGCTGGTGCTGCCGGAGTCTGAGGGGGAGTTTTGCAGAAAAAACATCGTCGACCCAGAAGAC
CCCCGATGTGCCCGGTTAACGCTCACCGGCCGGATGGTCACGGTGCCACCAGGGGAGGTGGAGTTCGCCA
AGCAAGCCATGTTTTCAAGGCACCCAGGGATGAGGAAGTGGCCCCGACAGTATGAATGGTTCTTCATGAA
GATGTGGGTAGAACACATCTGGCTTCAGAAATGGTATGGAGGTGTATCTGACATCCCGAGGGAGGAATAC
TTCAAGGCAGCTCCAAGGAAGGCCTGA

Translation (288 aa):
MSLSGRERPAWPGSRLSWLLCCSALLSPAAGYVIVSSVSWAVTNEVDEELDSASTEEALPALLEDSSSIW
QQSFPASAHKEDTHLRPRGSARARPAPAARGMFSYRRESGSSEASPGPRVHAGTARSLAHASSWGCLATV
STHEKIQGLPFGSCLAISDGPVHNSTGIPFFYMTAKDPAVADLVKNPTASLVLPESEGEFCRKNIVDPED
PRCARLTLTGRMVTVPPGEVEFAKQAMFSRHPGMRKWPRQYEWFFMKMWVEHIWLQKWYGGVSDIPREEY
FKAAPRKA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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