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Report for CCDS41133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41133.1 Public Mus musculus X Kir3dl2 23 108 98 CCDS HistoryNCBI Gene:245615Re-query CCDS DB by CCDS ID:41133.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 41133.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072125.5 ENSMUSP00000071994.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072125.5Link to Ensembl Protein Viewer:ENSMUSP00000071994.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000072125Re-query CCDS DB by Protein ID:ENSMUSP00000071994
Original member Current member EBI ENSMUST00000113108.7 ENSMUSP00000108732.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113108.7Link to Ensembl Protein Viewer:ENSMUSP00000108732.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113108Re-query CCDS DB by Protein ID:ENSMUSP00000108732
Original member Current member NCBI NM_177748.2 NP_808416.1 Accepted alive Link to Nucleotide Sequence:NM_177748.2Link to Protein Sequence:NP_808416.1Re-query CCDS DB by Nucleotide ID:NM_177748Re-query CCDS DB by Protein ID:NP_808416Link to BLAST:NP_808416.1

Chromosomal Locations for CCDS 41133.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136448669 136448676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136448768 136448818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136449409 136449525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136452329 136452367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136453257 136453553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136456057 136456362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136457519 136457797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136468734 136468769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136469003 136469036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1167 nt):
ATGCTGCTCTGGTTCCTCAGCCTCATGTGTTCTGGTTTCTTCCTAGTCCAGAGGATGTCAGCACACGTGG
GAAGTCATGATAAACCATTCCTATATGCCTGGCCAAGTTATGTTGTTCCTCTGGGACAGAATGTGACTCT
TACATGTGACTCTCATAGAGGATCTAACATATTCAAACTGTACAAAGAAGAAGGGTCTCCAATCCCTCAG
TTACATGAGACTACATTTCAGAAGAGCCAGGTCTTTGGTCCTGTGACCACAGAACATGCAGGAACCTACA
GATGCTTCCATCCTCAATATGCTAATGTATTGTCAGCACATAGTGAGCCTCTGAAAATCATAATTTCAGG
AATCTACTTGAAGCCTTTCCTCTTGATTCTACAAAGTCCCCTGGTGAATTCAGGAGGGAATGTGACCCTG
GAATGTCACTCAGAGAATATGTTCGATACATACATTTTGATTTCACACAGAATGGGAATAATCAAGAACT
CTGTCCAAGTTTCTGCAGAACATCATGAAAGTGGGTCACATGTCACCTACTCAATAGGTCCCATGACACC
TGACCTTGTTGGGACTTACACATGCTATGGTGCTAACAGTTACTACCCCTATGAATGGTCAGACCCCAGT
GACCCCATTGACATCAAGATCACAGGTGTATACAAGAAACCTTCTCTGTCAGTCCTGATGGGGCCTGTGC
TGATGATGTCAGGAGAAACCATGACCCTGTCTTGCATCTCTGACCATCAGTTTGACATGTTCCATATGTC
CAGGGAAGGGGTGCCTCAGGGACAGGGGATGCCTGGAGTGCAGATCCACAGTGGTAAATTCGAGGCAAAA
TTCCTTCTTAGTTCAATGATCCAAAAGGGGAACTATAGATGCTATGGCTCTTTCAGGAACTCTTCCCATG
TGTGGTCCTCCCCAAGTGACCCCTTGTACCTTCCTGCCAAAGGAAACTGTCCTGCATGCACAGAAGAAGA
TCCCAAAATACATAACTGCAAGAACCTGCGCATTCTAACTGGGCTCTTAATGACCATGGTCCTTGTCATC
ATCATCATCTTTTATTCTTGTTACTTTCCCAAACAGAATAAGTCTCAGAAACAAGCAGCAGCCAGCATGG
AACAAGAGTCTGAAGTTAAAAAACACAATAAACAGACAGCTTTCTAG

Translation (388 aa):
MLLWFLSLMCSGFFLVQRMSAHVGSHDKPFLYAWPSYVVPLGQNVTLTCDSHRGSNIFKLYKEEGSPIPQ
LHETTFQKSQVFGPVTTEHAGTYRCFHPQYANVLSAHSEPLKIIISGIYLKPFLLILQSPLVNSGGNVTL
ECHSENMFDTYILISHRMGIIKNSVQVSAEHHESGSHVTYSIGPMTPDLVGTYTCYGANSYYPYEWSDPS
DPIDIKITGVYKKPSLSVLMGPVLMMSGETMTLSCISDHQFDMFHMSREGVPQGQGMPGVQIHSGKFEAK
FLLSSMIQKGNYRCYGSFRNSSHVWSSPSDPLYLPAKGNCPACTEEDPKIHNCKNLRILTGLLMTMVLVI
IIIFYSCYFPKQNKSQKQAAASMEQESEVKKHNKQTAF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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