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Report for CCDS29095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29095.1 Public Mus musculus 18 Mapre2 23 108 98 CCDS HistoryNCBI Gene:212307Re-query CCDS DB by CCDS ID:29095.1Re-query CCDS DB by GeneID:212307See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29095.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025127.4 ENSMUSP00000025127.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025127.4Link to Ensembl Protein Viewer:ENSMUSP00000025127.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025127Re-query CCDS DB by Protein ID:ENSMUSP00000025127
Original member Current member NCBI NM_153058.4 NP_694698.3 Accepted alive Link to Nucleotide Sequence:NM_153058.4Link to Protein Sequence:NP_694698.3Re-query CCDS DB by Nucleotide ID:NM_153058Re-query CCDS DB by Protein ID:NP_694698Link to BLAST:NP_694698.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694698.3 326 Q8R001-1 326 100% 0 0

Chromosomal Locations for CCDS 29095.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23804103 23804221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23832853 23832980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23853654 23853799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23857944 23858157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23877944 23878083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23883538 23883696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23890857 23890931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGCCCGGGCCGACCCAAACGTTGTCCCCAAATGGCGAGAACAACAACGACATCATCCAGGATAACGGGA
CTATCATTCCTTTCCGGAAGCACACAGTGCGCGGGGAGCGGTCCTACAGTTGGGGAATGGCGGTCAATGT
GTATTCTACCTCGATAACCCAGGAGACTATGAGCAGGCATGACATCATTGCATGGGTCAATGACATCGTG
TCTCTAAACTACACAAAAGTGGAACAGCTCTGTTCAGGAGCAGCCTATTGCCAGTTCATGGACATGCTCT
TCCCGGGCTGTATTAGTTTGAAGAAAGTAAAATTCCAAGCAAAGTTGGAGCATGAGTATATTCACAACTT
TAAACTTCTGCAAGCATCCTTTAAACGGATGAATGTTGATAAGGTAATCCCAGTGGAGAAGCTGGTGAAA
GGGCGTTTCCAAGACAACCTGGATTTTATTCAGTGGTTTAAGAAGTTCTACGATGCTAACTATGACGGGA
AGGAGTACGATCCTGTTGAGGCCCGACAAGGGCAAGATGCAATTCCTCCCCCTGACCCTGGTGAACAGAT
CTTCAACCTGCCCAAGAAGTCGCACCATGCAAACTCCCCCACAGCAGGCGCGGCTAAGTCAAGTCCTGCA
TCTAAGCCAGGATCCACACCTTCTCGCCCCTCGTCTGCCAAAAGGGCTTCATCCAGTGGCTCTGCATCCA
GATCTGACAAAGATTTAGAAACGCAGGTCATACAGCTCAACGAGCAGGTACATTCATTGAAACTCGCCCT
AGAAGGTGTGGAGAAGGAGAGGGATTTCTACTTCGGGAAGTTGAGAGAGATTGAGCTGCTGTGCCAAGAA
CATGGGCAGGAGAACGATGACCTCGTGCAGCGACTAATGGAAGTGCTCTACGCTTCCGATGAACAGGAGG
GCCAAACGGAAGAGCCAGAAGCAGAGGAGCAAGCCCATGACCAGCAGCCCCAGCAGCAGGAGGAGTACTG
A

Translation (326 aa):
MPGPTQTLSPNGENNNDIIQDNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIV
SLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVK
GRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAAKSSPA
SKPGSTPSRPSSAKRASSSGSASRSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQE
HGQENDDLVQRLMEVLYASDEQEGQTEEPEAEEQAHDQQPQQQEEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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