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Report for CCDS10660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10660.1 Public Homo sapiens 16 ASPHD1 24 110 108 CCDS HistoryNCBI Gene:253982Re-query CCDS DB by CCDS ID:10660.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308748.10 ENSP00000311447.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308748.10Link to Ensembl Protein Viewer:ENSP00000311447.5Re-query CCDS DB by Nucleotide ID:ENST00000308748Re-query CCDS DB by Protein ID:ENSP00000311447
Original member Current member EBI ENST00000414952.6 ENSP00000388036.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414952.6Link to Ensembl Protein Viewer:ENSP00000388036.2Re-query CCDS DB by Nucleotide ID:ENST00000414952Re-query CCDS DB by Protein ID:ENSP00000388036
Original member Current member EBI ENST00000566693.1 ENSP00000456801.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566693.1Link to Ensembl Protein Viewer:ENSP00000456801.1Re-query CCDS DB by Nucleotide ID:ENST00000566693Re-query CCDS DB by Protein ID:ENSP00000456801
Original member Current member NCBI NM_181718.4 NP_859069.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181718.4Link to Protein Sequence:NP_859069.2Re-query CCDS DB by Nucleotide ID:NM_181718Re-query CCDS DB by Protein ID:NP_859069Link to BLAST:NP_859069.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859069.2 390 Q5U4P2 390 100% 0 0

Chromosomal Locations for CCDS 10660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 29900972 29901920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29904852 29904965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 29905788 29905897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1173 nt):
ATGAAGGAGGGGAGAGGGAGCTTCAGCGTGGAGAGAGGACCGCGGAAGGAGAGAGAGACAGCCCAGAGTG
GAATGTGGAAGGGAAACAGTCCAGCGGGGAGCCAGGGGGCAGCCATGGAAGGGACAGGTGGGGAGCTGGG
GGGACAGGGGAACTGGGGTCCGGAGGACGCCCCAGGCCTCTTGGCCAGGGCCTCCCTGATCATGCTCCCG
TGGCCACTACCCCTGGCCTCCTCGGCCCTCACCTTGCTCTTCGGGGCCCTCACTTCCCTGTTCCTCTGGT
ACTGCTACCGCCTGGGCTCCCAAGACATGCAGGCCCTAGGGGCTGGGAGCCGAGCTGGGGGTGTTCGTGG
TGGGCCTGTGGGATGCTCGGAGGCCGGCGGGCCAAGCCCAGGGGGTCCTGGGGATCCCGGGGAAGGACCT
AGGACGGAAGGCCTAGTGAGCCGGCGGCTTCGGGCCTACGCAAGGCGCTACTCCTGGGCTGGGATGGGTA
GAGTGAGGCGGGCAGCTCAGGGTGGCCCAGGCCCTGGGAGAGGGCCAGGGGTCCTAGGTATTCAGCGCCC
AGGCCTGCTTTTCCTACCAGACCTGCCTTCAGCCCCCTTTGTGCCGCGGGACGCCCAGCGGCACGACGTG
GAGCTCCTGGAGAGCAGCTTCCCTGCCATTTTGCGGGACTTCGGGGCTGTGAGCTGGGACTTCTCAGGGA
CTACCCCTCCGCCTCGGGGCTGGTCCCCACCTCTGGCCCCCGGGTGCTACCAGCTCCTGCTGTACCAAGC
AGGCCGGTGCCAACCCAGCAACTGCCGCCGGTGCCCGGGGGCCTATCGGGCACTGAGGGGGCTTCGAAGC
TTTATGAGTGCCAACACCTTCGGCAATGCCGGCTTTTCCGTTCTCCTGCCTGGGGCCCGGCTCGAGGGCC
GCTGTGGGCCCACCAATGCCCGGGTCAGATGCCATCTGGGCCTAAAGATCCCTCCTGGCTGTGAGCTGGT
GGTCGGCGGTGAGCCCCAGTGCTGGGCTGAGGGGCACTGTCTACTGGTGGACGACTCTTTTCTACACACA
GTGGCTCACAATGGCTCCCCCGAAGATGGGCCTCGAGTGGTCTTCATCGTGGACCTCTGGCACCCCAACG
TGGCAGGGGCTGAGCGCCAGGCCCTCGACTTTGTCTTCGCCCCAGACCCTTGA

Translation (390 aa):
MKEGRGSFSVERGPRKERETAQSGMWKGNSPAGSQGAAMEGTGGELGGQGNWGPEDAPGLLARASLIMLP
WPLPLASSALTLLFGALTSLFLWYCYRLGSQDMQALGAGSRAGGVRGGPVGCSEAGGPSPGGPGDPGEGP
RTEGLVSRRLRAYARRYSWAGMGRVRRAAQGGPGPGRGPGVLGIQRPGLLFLPDLPSAPFVPRDAQRHDV
ELLESSFPAILRDFGAVSWDFSGTTPPPRGWSPPLAPGCYQLLLYQAGRCQPSNCRRCPGAYRALRGLRS
FMSANTFGNAGFSVLLPGARLEGRCGPTNARVRCHLGLKIPPGCELVVGGEPQCWAEGHCLLVDDSFLHT
VAHNGSPEDGPRVVFIVDLWHPNVAGAERQALDFVFAPDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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