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Report for CCDS48414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48414.1 Public Mus musculus 1 Ankrd45 23 108 98 CCDS HistoryNCBI Gene:73844Re-query CCDS DB by CCDS ID:48414.1Re-query CCDS DB by GeneID:73844See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48414.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052245.8 ENSMUSP00000059923.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052245.8Link to Ensembl Protein Viewer:ENSMUSP00000059923.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000052245Re-query CCDS DB by Protein ID:ENSMUSP00000059923
Original member Current member NCBI NM_028664.1 NP_082940.1 Accepted alive Link to Nucleotide Sequence:NM_028664.1Link to Protein Sequence:NP_082940.1Re-query CCDS DB by Nucleotide ID:NM_028664Re-query CCDS DB by Protein ID:NP_082940Link to BLAST:NP_082940.1

Chromosomal Locations for CCDS 48414.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161142767 161142840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161150965 161151317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161155246 161155413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161160667 161160761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161163267 161163405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161164172 161164191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGGGGCAGAATAGACCCGCATCATCACTACGGGATCCTGGCGTCAGGGGCTGCCGTGGTGGGCGTCATC
CAAGGTATTTTTTTTTTTTTTTTTTGGAGTTAATGGAGCCAGAAGAAACTCTAGAATCGGAGAGTTCAGA
AAAGTCACTATTTTCCTCACAGCAAGAGTATGAAGAGTCGCAAGAAGCAGAAGAAACAGGCGCTGAGAAC
CCCCTTCTGCAGCCCACTCTCACTGGGGACGTGGAAGGTTTGCAGAAGATTTTTGAGGACCCTGAACATC
CTCACCATGAGCACGCTGTGCAGCTGCTTTTGGAAGAAGACATTGTTGGGAGAAATCTGTTGTATGCAGC
TTGCATGGCTGGCAAAAGTGACGTAATTAAAGCCTTGGCAAAGTATGGGGTGAATCTGAATGAGGCAACT
GCCAGAGGGTACACGCTCTTACACTGCGCTGCAGCCTGGGGCCGTCTGGAAACTTTGAAGGCCCTGGTGG
AACTGGATGTTGACATAGAGGCTTTGAACTTCCGGGGAGAGAAAGCTCGGGATGTTGCTGCTCGTTATTC
TCAGGTTGAATGTGTTAATTTTCTGGACTGGGCAGATGCAAGGCTGATTCTGAAAAAAATTATTACAAAG
TCCTCCCTCATCATTACTGACCCAGAAAAGGGACCGGGGAAACTCTTCAAGGAAGACAAGAGCACCATCC
TCAATGCGTGCCGTCTGAAAAACGAGTGGTTGGAAAGCCATCCAGAGGCTTCCATTAGTGAGATTTTTGA
GCAGAAACAACAATTGGAAGATATCGTCTCCCCCATCCTAGCAAAAATGTCTACACCACGTCATTTTGCT
GCCTCATAA

Translation (282 aa):
MGQNRPASSLRDPGVRGCRGGRHPRYFFFFFLELMEPEETLESESSEKSLFSSQQEYEESQEAEETGAEN
PLLQPTLTGDVEGLQKIFEDPEHPHHEHAVQLLLEEDIVGRNLLYAACMAGKSDVIKALAKYGVNLNEAT
ARGYTLLHCAAAWGRLETLKALVELDVDIEALNFRGEKARDVAARYSQVECVNFLDWADARLILKKIITK
SSLIITDPEKGPGKLFKEDKSTILNACRLKNEWLESHPEASISEIFEQKQQLEDIVSPILAKMSTPRHFA
AS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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