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Report for CCDS48264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48264.1 Public Mus musculus 1 1700066M21Rik 23 108 98 CCDS HistoryNCBI Gene:73467Re-query CCDS DB by CCDS ID:48264.1Re-query CCDS DB by GeneID:73467See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48264.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042734.2 ENSMUSP00000040240.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042734.2Link to Ensembl Protein Viewer:ENSMUSP00000040240.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000042734Re-query CCDS DB by Protein ID:ENSMUSP00000040240
Original member Current member NCBI NM_028546.1 NP_082822.1 Accepted alive Link to Nucleotide Sequence:NM_028546.1Link to Protein Sequence:NP_082822.1Re-query CCDS DB by Nucleotide ID:NM_028546Re-query CCDS DB by Protein ID:NP_082822Link to BLAST:NP_082822.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082822.1 365 Q9D9H8 365 100% 0 0

Chromosomal Locations for CCDS 48264.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 57377671 57377946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57382743 57383564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGCTGGGGTCGCGGCGTCTGCGGTCCCCCGCGCTGGTGCTGCTGCTGCTGCGGCCGCTGCTCGCTTCCG
GAGACTCCGCGTCCCGCCTGCAGACCCGAGCCATGAACCCGGGCGGCGGTGAGCGGGGCTCCCCGGAGGA
CAGCCACCGTCTGCAGCGCTCCACGGTGCCGGGCTCCGACCCGCAGCGCAGCAACGAACTGCTCCTGCTG
ACATCCCGGGAAGGAGATTCCCCGGAGCAGCGGCACCACGTCCTCTACTTCCCTGGGGACGTGCAGAATT
ACCATGAGATTATGACTCGTCATCCTGAGAATTATCAATGGGAAAATTGGAGTCTAGAAAACATTGCTAC
CATTTTAGCCCGCCGTTTTCCCAATAGTTATATTTGGGTAATAAAGTGTTCCCGAATGCATTTGCACAAA
TTCAGCTGCTATGACAATTTTGTGAAAAGCAACATGTTTGGTGCACCAGAACATACTCCGGACTTTGGAG
CCTTTAAGCACTTGTATATGTTATTAGTTAATGCTTTTAACCTGACTCAGAACGGTATGCTGTTCAAGAA
CAGGAGTGTTTGGAATAAGGATTGTAAAGCATCTAACTGTGAGTCTAATCCTTCTACTAGTAATGGTGGC
CAAAAGGAAAACGAGAGGACCTGTGAGCATGTTGATGAGCCTTCCATGAGTTTTCCTCCACTGTCATTGG
ATGGTGCATCGTTTACTTTGATTGGATTCAGTAAAGGCTGTGTTGTTTTGAATCAGTTGCTGTTTGAGTT
GAAGGAAGCCAAGAAAGACAAGAACATAGATGCATTCATCAAAAGCATAAGAACAATGTACTGGCTAGAT
GGTGGGCATTCTGGAGGAAGCAATACGTGGGTCACATATCCAGAAGTCTTGGAAGAATTTGCTCAAACAG
GAATTACTGTTCACACTCATGTAACACCTTACCAAGTACATGATCCAATGAGATCCTGGATTGGAAAGGA
GCACAAGAAATTTGTTCAGATACTCAGGGATTTGGGTATGCAAGTGACCAGCCAAATTCATTTTGCGAAG
GAAACTCCTTCCATAGAGAATCATTTCAGGGTTCACGAAGTATTCTGA

Translation (365 aa):
MLGSRRLRSPALVLLLLRPLLASGDSASRLQTRAMNPGGGERGSPEDSHRLQRSTVPGSDPQRSNELLLL
TSREGDSPEQRHHVLYFPGDVQNYHEIMTRHPENYQWENWSLENIATILARRFPNSYIWVIKCSRMHLHK
FSCYDNFVKSNMFGAPEHTPDFGAFKHLYMLLVNAFNLTQNGMLFKNRSVWNKDCKASNCESNPSTSNGG
QKENERTCEHVDEPSMSFPPLSLDGASFTLIGFSKGCVVLNQLLFELKEAKKDKNIDAFIKSIRTMYWLD
GGHSGGSNTWVTYPEVLEEFAQTGITVHTHVTPYQVHDPMRSWIGKEHKKFVQILRDLGMQVTSQIHFAK
ETPSIENHFRVHEVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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