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Report for CCDS47233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47233.1 Public Homo sapiens 5 ANKRD31 24 110 108 CCDS HistoryNCBI Gene:256006Re-query CCDS DB by CCDS ID:47233.1Re-query CCDS DB by GeneID:256006See the combined annotation on chromosome 5 in Sequence Viewer

Public Note for CCDS 47233.1
The exon combination of this CCDS representation is inferred based on available partial human transcript alignments and homology data.

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 47233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274361.3 ENSP00000274361.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000274361.3Link to Ensembl Protein Viewer:ENSP00000274361.3Re-query CCDS DB by Nucleotide ID:ENST00000274361Re-query CCDS DB by Protein ID:ENSP00000274361
Original member Current member NCBI NM_001164443.1 NP_001157915.1 Accepted alive Link to Nucleotide Sequence:NM_001164443.1Link to Protein Sequence:NP_001157915.1Re-query CCDS DB by Nucleotide ID:NM_001164443Re-query CCDS DB by Protein ID:NP_001157915Link to BLAST:NP_001157915.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157915.1 1873 Q8N7Z5 1873 100% 0 0

Chromosomal Locations for CCDS 47233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 75068519 75068664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75080568 75080639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75084272 75084374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75091261 75091401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75104228 75105218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75107521 75107617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75112513 75112600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75116566 75116681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75118135 75118297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75137856 75137998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75138846 75138983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75145987 75147505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75148576 75148628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75154201 75154345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75168979 75169121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75188493 75188648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75192667 75192776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75193311 75193591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75195631 75196200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75199631 75199674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75206411 75206487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75210828 75210865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75222249 75222358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75230562 75230635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75236583 75236686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5622 nt):
ATGGAGGAAGGCGTCCAGGCCCCAGACTGGGACAGTGATGAAACTGTGATAGAGGGTTCAGTGACGGAGA
GCGACCTGGAAGAAAAGGAGCTGCCCTGGAGAAGGTTGCTGTTTGATCAAGACGCATCTCTTAAATCTGA
GTTCAGTCTGCATCCTGATACAAGAGGAATGTGCAAAGGCATGCCTTCTCCTGAGATTCAACTTGGATTT
AAGCTCAGAGAGGATCTGCAAGAGCAAATGAATAAAAATAAGATGATGCCTGTTCTTAGCGAGGATACAA
TATTACAGTCTCAAGATGAAACAGAACGAAATCAAGCTCTGTTACAGACTAGAAAAAACTGTTCAATGTT
CATTGGGTCGTTTCGCCAGTCTGGACTTTCATTGAACCACCAAAATATTGAAGGGCCAGAGGCTGAAAGT
CCTGAAGTTTTGCCACACATAGAAAAGGAACTAAGTGAAGGCAGAGATTCTCCTGAAGTTAGCCTTCTCT
CAGGCACTGCTATTACAGTATCTGATACAGTTGCTGTAAAGGAGACATCATTAGTAGAGCCAGAGAAGAT
TTTAGCAGCACCAAATACATTTTTTGAGCCTAGAAAGGAAGTCACAATGACCATGACTTCTGAAGAAACT
AAGGATGAAGAAAGCTCTCTTGAAACCTTTGTGTCTGCCTTAGAAAGTTTACTTACATCACCAGAAAGCA
CCCAGGAGGAAAGATTGTTTGAATTAGTAAGTGATTTTGATCGTAAAGAATTGATGAACCCATTGAGTGA
CTCTCTTAGTTCCATATCAATACCTTTGAATTCCTGGTCGGCATGTCATAGAGATTTACTAGAAGATGCA
AAAGATGATGCATTGCCAGCTGAGTTATTGGAAGCCCTGAACACATTGTCAGAAGCCAAGGTGGAAACCA
TCTGTCACAGAAAAGAGGGAGGTAGCAGTCTCATTGCCAGAAATGAATGTTTAGAAGTGGAGTTCAATAC
GTCTCAGACCAATGAAGATTGTACACAAATAGCAGAGACTCTGCAAGACCCAAATCCATCTGGATTGCAA
ACTTTGGCTCATCAAAATATCACTTCTTGTGAGCCACTAAGTAATAAGAGAAATTCAAATTCAGTGACAA
ATAGCTCTGATCAGGAAACTGCGTGTGTGTTGAGGAGATCATCCAGACTAGAAAAACTGAAAGTAAGCAG
AGATGCAAAGTACTCAGATCACATGTATAAGATGCCAGAAAAGATTTTACCAAAAATCCTTGGCTGTGAG
GACCTAACAAATAATAACTCTTCAGCTCAGAATTTCAGAATGCAGGATCCGGCTTTAATGATTGATGGTA
AAGAGAAGAATATGCATTCAGCAAGGTTCAAGAATGGAAAACAGATCAGGAAAAATGAACAATTTTCAGG
AAAAAAAGAAAAAATGAAGGTGAACAAAATATCTCTTCATAGCATTAACCGGAGAAACATTTTTGGAGAG
AACTTAGTATATAAGGCTGCTCTACACGATGATGCTGATCTTGTTCATCATTGTATAAAAAAAGGTGGAA
ATGTTAATCAGCCAAGTTATGCTGGTTGGACAGCACTTCATGAAGCTAGTGTAGGAGGATTTTATCGGAC
AGCAAGTGAACTATTAAAAGGTGGAGCAGATGTAAATATCAAAGGATTATACCAGATTACTCCCCTACAT
GATGCAGTGATGAATGGACATTATAAGGTGGCAGAGTTACTTCTTCTGAATGGAGCTGATCCATTATTTA
GAAATGATGATGGAAAATGTGCTTTGGATGAGGCCAAGGATTTATGTATGAAGCGTCTCCTTGAGAGATA
TATCCCTAAACATCAAAAATGCCTTACATCAGCTCAAAGGAGTAGCATTGACCCACTAGACATAGAGGAT
GTGTACCAACACAAGAAACCAAAGTTCAGTTCTAAAAGTCACATTTGGCATGTTTATAATGAAAATTCCA
ACAGACAGAAGCTGGAACATGTAAAAGTCAATAAAGGAAGCAAAGCGAGTTTATTTATAAATAAAGAAGA
TGTATATGAATATTACCAAAAAGATCCCAAAAACACAAAATTTGGTAAATCCAAGCATAAACAATCAACT
CTTGACCAGATATACTCTACAGGACTCAGAAAGGGCAATCTCCATAACGTCAAAGATCCCAACACAAACG
TACCAAAAGGTATAGGAAGAAGAAAAACACAACATAAAAGGACCCAAGTAGATGATGTAGACTGTAATCC
AAGAAAGATACTAGCTGTCTCTCCTTCCAGGAGAATAAACAGATTGGTTACCTATCAGCAGCATATTCCA
GAAACTCATAATGACCTTCCAGAAGAATTGTGTGAACCTTCCAGCTTAACTCTGTCAAGCCTGAGAAATG
GATTAGATAGCAGTACTGAGGCTTGTTCAGTTTCCAAAGAGAAACACATCCAGAACCTGGATTTATCAGA
TAGTCAAGAAGTTCAATGCTTGGAATTAGAATCTGTTGACCAAACTGAAGCTGTTTCTTTCCCAGGGCTT
TTATTACATAAAGAAATCAAGTTACCAGTTGTTACTACAGATAAGCAGCCTCACACTCTCCAGGAACAAC
ACCATGTACTTTATAAATCTCATGAAAACAGTAACTTGGTCCCAAAAGATGAGAGATTTAACAAATGGGA
AAATTCTTTCCTATCCTTTGTAAAGGAAAATTCTGATAATGATGATGATGATGATTGCTCTACCTCTGAG
AAGGCTATAACATCTAAAAAGGTGTTGTGTTCTACAGGTGGCAAAAAACACTATAATTTTAAGGAGAATT
TAACAAATAAAAAAGAAATGGGTTTCCAACAGTTTTTACTTTCTGAAGATCATCTTTCACAGGAAAATGA
GTTAAAAGCAGTCAGCCTAACCACACTTCCAGAACAGGAAGCTGTTAATTTTTCTTATTCAGATAATGCA
GTTATTTCTGAACATGTTGCAAATTATGAACAATGCATATTTGGACCTTCTTTTGATCACTCAAATGGCA
ATCCTGAGCAAAATTCCCTGGCTTGTATGAGAACACTTTTGACACATGAGGCTTCAAAGTTGACTAATCA
TGTGGAGCTATTCAAAAAGCCACAGGATTATATTCCCAGAGCACCAACTTTTTTAATGAATCAAACAGAT
ACACATATTGTGGAAAAGATGGCAAAGAATTGTGACACTGAGAGGAATTACATTGACAGAGACCAAAAAA
TAATTTATTCAAATGAGCCTTTATCCATAGTTGCTCATTCTCAAGTAATAGAAACAACTAAAGTTGAAAA
AAGGAGACAAAACCATCTAGAAAGTGAGACTATACACAATATAGATTCTCATTCCACTGACAATATGAGT
AAAGAATTGGCCAACATCTCAAAACTTAGTCAAAGAGAAAAGAAGGAAATTTCTCACAAACCAGGAATGA
AAGCAGGTAGGATCAACAAGAGGAATGCCAGAGGGGAAAGCCAGCTTCATTTAGCTGTCAGAAGAGGAAA
TCTGCCCCTAGTGAAAGCCCTGATAGAATCTGGAGCAGATGTGAATCTAAATGATAATGCAGGTTGGACA
CCACTTCATGAGGCATCTAATGAAGGATCTATTGATATAATTGTAGAGTTATTAAAAGCTGGTGCTAAGG
TTAATTGTGAAAATATAGATGGAATTCTGCCCTTACATGATGCTGTTGCAAACAATCATTTAAAGGCAGC
TGAGATTCTACTACAAAATGGAGCAAACCCTAATCAAAAAGATCAAAAACAGAAGAGTGCTTTGGATGAA
GCAGATGATGAAAAAATGAAAGAATTACTAAGATCTTATGGTGCTATTGAGACTGTTAATAGAGATGAGA
GTGATGCTATAGTCAATGAAAAAATTCCTGCTGTCCGGTCTAAAAGACATAAACAGTGTTTTTGTGATGA
TGGCAAAACTATTGACTCATCTTCCCTTTCACACCAAGAAAGATCAAGAGAAAGCCTTTCTGTGCATCAG
ACCCTCAGTGCCATTCTACAAGATATAGAAGAAAAACAAGAATATTTATTAGAGTTTGAAATAAGAAACC
CTGAAGATGCAGAACAATACATTGAAAAGATGTTAAAGATAAAAAAGATTATGGATAATGTGCTTGCCAA
GCAGAAAGCAGAAAGGGATGATCTGGCTAAAAAATACAGGGTATCCATAGAGTCATTTAAGCATGGAGCC
CTGAGAGAACAATTGGCCAACTTGGCTGCAAGACAGAAGAGCCTTTTAGTTGTGGCAAAAAAACAGAAAA
AAATAAGCCTGAAAATTCAAAACTGTAGGAATGTTACATCATTGCCTTGTCTTAGTTTAAGGAAGCTCCC
ACCCAGATCAGAAATCTCTAGTGAAAAAGACAGCCAAGAGCTCACTAGTCTGGAAAATTTAGAGCATCCC
CAATCAGGTTCACTTTCTCCTGTTTCTGGAAGCATGCAGGAAACACAATTGTCTCTGGAAACTTGGAACT
ACAGCCAAAATACCAACATTTGTCTAAATTCAGAGGCAGTGAGAAGGGGAGAATTTTCTGGAAATGATAT
GAATTCTAAACAAAATGGCAGTGATTGTACCTTGGATGGTTTTCCAAAATCCAGACATTCAGATGGCACA
GAGAAGAATAAATTACCATCCCAACCTGTTGCTTTTATTGGTCAAACAGAATATTCACAGAAAGAGAATG
ATCTTACAGAAGCTACAGACAAAGACCATGAATTCTATGTTTCTTCCCCAGTAATCGGCAAATTAAATAT
TTCAGAAACTGCAAGTGTCCTTGCCGAAAATGCTGCCCATCCATCAAATATTATTTGTGATCAGGACCTT
TCCAATTATGATCCCAAAAGAGGAAACAGAAAAACAAGTTCCCAGCAATCACCTACAGGGGCATCAGAAT
CTCTGGCACATCAAGGGATTGCTGTCTTAGGCAGTGATACAGTGCATCAGATGAAACCATATCTTAAAAA
ATCAGTTTCTGTTGTTCCATGTGCAGATGACAGTCAGATCTCCTCTTCCTCTGGATCTGGGCAACAAGAT
ACAATAAAAAAGGCTTTAAACTACAGTACAGCTCCTAAAAAGAAATGTATTCAGATAAAAGATTTGATAT
TACTAGGAAGAATTAACCCAGGAAATAACATTCTGGAATTCAAAACACAGGAGACTACCCACAAAGCCAG
TATTTTATTGAATGGTAAACTTAAGGTAGAAAGTGGTCAGATTTATAAAAACCCAGTCACCTGGCTCAAG
GATCTTCTGGGAGGCAACAGTTATGTGACCTGGAATTATGCTTGGAGTAAGGTAACGTATCTTGGGAAGG
AGCTTTTAAGGTATGTTTCTGAGGATGCACCCATACTTCCAGAACCAAACTCAGTACCTCAGCAATATCA
ACCTTGTCTTCCAGAAGTTGCTTGTTTAGATGACCCAGTACAGGAACCAAACAAATCAATGTTTGAGAAA
ACAAAATTTGGACAAGGAACTTCCAGAGAGTCAATGCAAAGCAGCCCACGTTATCTACAAATAAATGAAA
TACTATTAATCAGTGATCAAGAATTTCTCCCATGCCACATAATGGATCAGCATTGGAAGTTTTGTGTGGA
ATGTGAGGAACTAACACCCTAA

Translation (1873 aa):
MEEGVQAPDWDSDETVIEGSVTESDLEEKELPWRRLLFDQDASLKSEFSLHPDTRGMCKGMPSPEIQLGF
KLREDLQEQMNKNKMMPVLSEDTILQSQDETERNQALLQTRKNCSMFIGSFRQSGLSLNHQNIEGPEAES
PEVLPHIEKELSEGRDSPEVSLLSGTAITVSDTVAVKETSLVEPEKILAAPNTFFEPRKEVTMTMTSEET
KDEESSLETFVSALESLLTSPESTQEERLFELVSDFDRKELMNPLSDSLSSISIPLNSWSACHRDLLEDA
KDDALPAELLEALNTLSEAKVETICHRKEGGSSLIARNECLEVEFNTSQTNEDCTQIAETLQDPNPSGLQ
TLAHQNITSCEPLSNKRNSNSVTNSSDQETACVLRRSSRLEKLKVSRDAKYSDHMYKMPEKILPKILGCE
DLTNNNSSAQNFRMQDPALMIDGKEKNMHSARFKNGKQIRKNEQFSGKKEKMKVNKISLHSINRRNIFGE
NLVYKAALHDDADLVHHCIKKGGNVNQPSYAGWTALHEASVGGFYRTASELLKGGADVNIKGLYQITPLH
DAVMNGHYKVAELLLLNGADPLFRNDDGKCALDEAKDLCMKRLLERYIPKHQKCLTSAQRSSIDPLDIED
VYQHKKPKFSSKSHIWHVYNENSNRQKLEHVKVNKGSKASLFINKEDVYEYYQKDPKNTKFGKSKHKQST
LDQIYSTGLRKGNLHNVKDPNTNVPKGIGRRKTQHKRTQVDDVDCNPRKILAVSPSRRINRLVTYQQHIP
ETHNDLPEELCEPSSLTLSSLRNGLDSSTEACSVSKEKHIQNLDLSDSQEVQCLELESVDQTEAVSFPGL
LLHKEIKLPVVTTDKQPHTLQEQHHVLYKSHENSNLVPKDERFNKWENSFLSFVKENSDNDDDDDCSTSE
KAITSKKVLCSTGGKKHYNFKENLTNKKEMGFQQFLLSEDHLSQENELKAVSLTTLPEQEAVNFSYSDNA
VISEHVANYEQCIFGPSFDHSNGNPEQNSLACMRTLLTHEASKLTNHVELFKKPQDYIPRAPTFLMNQTD
THIVEKMAKNCDTERNYIDRDQKIIYSNEPLSIVAHSQVIETTKVEKRRQNHLESETIHNIDSHSTDNMS
KELANISKLSQREKKEISHKPGMKAGRINKRNARGESQLHLAVRRGNLPLVKALIESGADVNLNDNAGWT
PLHEASNEGSIDIIVELLKAGAKVNCENIDGILPLHDAVANNHLKAAEILLQNGANPNQKDQKQKSALDE
ADDEKMKELLRSYGAIETVNRDESDAIVNEKIPAVRSKRHKQCFCDDGKTIDSSSLSHQERSRESLSVHQ
TLSAILQDIEEKQEYLLEFEIRNPEDAEQYIEKMLKIKKIMDNVLAKQKAERDDLAKKYRVSIESFKHGA
LREQLANLAARQKSLLVVAKKQKKISLKIQNCRNVTSLPCLSLRKLPPRSEISSEKDSQELTSLENLEHP
QSGSLSPVSGSMQETQLSLETWNYSQNTNICLNSEAVRRGEFSGNDMNSKQNGSDCTLDGFPKSRHSDGT
EKNKLPSQPVAFIGQTEYSQKENDLTEATDKDHEFYVSSPVIGKLNISETASVLAENAAHPSNIICDQDL
SNYDPKRGNRKTSSQQSPTGASESLAHQGIAVLGSDTVHQMKPYLKKSVSVVPCADDSQISSSSGSGQQD
TIKKALNYSTAPKKKCIQIKDLILLGRINPGNNILEFKTQETTHKASILLNGKLKVESGQIYKNPVTWLK
DLLGGNSYVTWNYAWSKVTYLGKELLRYVSEDAPILPEPNSVPQQYQPCLPEVACLDDPVQEPNKSMFEK
TKFGQGTSRESMQSSPRYLQINEILLISDQEFLPCHIMDQHWKFCVECEELTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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