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Report for CCDS27752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27752.1 Public Mus musculus 15 Mapk8ip2 23 108 98 CCDS HistoryNCBI Gene:60597Re-query CCDS DB by CCDS ID:27752.1Re-query CCDS DB by GeneID:60597See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27752.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023291.5 ENSMUSP00000023291.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023291.5Link to Ensembl Protein Viewer:ENSMUSP00000023291.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000023291Re-query CCDS DB by Protein ID:ENSMUSP00000023291
Original member Current member NCBI NM_021921.3 NP_068740.3 Accepted alive Link to Nucleotide Sequence:NM_021921.3Link to Protein Sequence:NP_068740.3Re-query CCDS DB by Nucleotide ID:NM_021921Re-query CCDS DB by Protein ID:NP_068740Link to BLAST:NP_068740.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068740.3 830 Q9ERE9 830 100% 0 0

Chromosomal Locations for CCDS 27752.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 89454221 89454285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89455184 89455289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89456525 89456803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89456920 89457016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89457135 89458370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89458742 89458817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89458916 89459088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89459182 89459291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89460376 89460483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89460652 89460722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89461360 89461458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 89461639 89461711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2493 nt):
ATGGCGGATCGCGCGGAGATGTTTTCTCTCTCCACCTTTCACTCGCTGTCGCCTCCCGGCTGCAGGCCTC
CCCAGGACATAAGCCTGGAAGAATTTGATGATGAAGACCTGTCTGAGATCACGGACGACTGTGGCCTGGG
CCTTAGCTACGACTCGGACCACTGTGAGAAGGACAGTCTCTCTCTGGGCCGCTCGGAGCAGCCACACCCT
ATTTGTTCCTTCCAAGATGATTTCCAGGAGTTTGAGATGATCGACGACAACGAGGAGGAGGACGATGAGG
AGGAGGAGGAAGAGGAGGAAGAGGAGGAAGATGGAGATAGGCAGGGCAAAGCAGGGGGAGGGCCTGGTTC
ACAGGCACTTGCTGGAGACTCCCTTATTCCCTCTCCTTCCCTAGAAGAGTCCCACAAGCTCCGACCCACC
ACTCTCCATCTGACTACACTTGGAGCACAGGACTCTCTGAATAACAACAACGGAGGCTTTACCTCTGCAC
CCCCATCCTCCTGGCAGGAGACTGTGCTGCGTTCGCCAGCCCAGGAGCCCCTTAAAGAGCTACCAGCCCC
TCTCCTGCCAGCAGAAGAGGAGCGCCATGAAGTACAGTCCCTTGCACGCCCTGGTTGTGACTGTGAAGGG
AACCAGCCCCCAGAGCCACCAGCATCATCAGGTGGGGCCTCCCCTTCCTCGGATCCTGGTATTGAGGCTG
ACTTGAGAAGCCACTCTAGTGGAGGCCACGAGGGTCGGCGAAGCAGTCAGGAGCTCTCATCACCAGGCTC
GGACTCTGAGGATGCAGGCGGCGCTCGCCTAGGGCGCATGATCTCGTCCATTTCGGAGACAGAGCTGGAA
CTTAGCAGCGACGGTGGCAGCAGCAGTGGCCGCTCATCACATCTCACCAACTCCATCGAGGAGGCTTCGT
CCCCAGCCTCGGAGCCTGAGCCGGAGCCCGAGCCACTACATGAACCTCCCCGCCGCCCTGCCTTCCTGCC
TGTGGGCCAGGATGACACCAACAGCGAATACGAGTCGGGCTCTGAGTCTGAGCCTGACCTGAGCGAGGAT
GCTGACTCTCCCTGGCTGCTCAGCAACCTGGTGAGCCGCATGATCTCTGAGGGCTCCTCGCCCATTCGTT
GCCCTGGCCAGTGCTTATCTCCTGCCCCACGCCTGCCAGAAGAGGCTGCGTCACAGGCCAACTCGGTACC
CCAGGACTGCCAAGACCCTGAGGCAGGGCCCCACGTGGAGTTGGTGGACATGGACACTCTTTGCGGGCCA
CCTCCGCCGGCGCCTGCCGCACCTCGGCTTGGTCCCGCGCAGCCTGGGCCCTGCCTTTTCCTTAGTAACC
CAACACGGGATACCATCACCCCGCTTTGGGCCACACCGGGACGCACTGCCCGCCCTGGCCGCTCCTGCTC
TGCTGCCTGCTCGGAGGAGGAGGAGGAGGATGAGGAAGAGGACGAGGAGGATGAGGAGGATGCGGAGGAC
AGCGTGGTTCCCCCTGGCTCCAGGACTACAGGCTCTACTGCGCCGCTGGATGCCTCGCTGGTGTACGATG
CAGTTAAATACACACTAGTGGTGGATGAGCACACGCAGCTAGAGCTGGTGAGCCTGCGGCGCTGCGCAGG
CCTGGGCAACGACAGTGAAGAGGACAGCAGCTGCGAGGCCAGTGAGGAAGAGGCGGGAGCTACGTTACTA
GGCAGTGACCAGGTGCCAGAGGATGCTTCTCCTGACAGTCCCGACCTCACCTTCTCCAAGAAGTTCCTCA
ATGTCTTTGTCAACAGCACGTCTCGATCCTCCAGCACTGAGTCCTTTGGTCTTTTTTCCTGTGTGGTGAA
TGGGGAGGAGAGAGAGCAAACGCACCGGGCTGTCTTCAGGTTCATCCCTCGACATCCGGATGAGCTAGAA
CTCGATGTGGATGACCCTGTGCTGGTGGAAGCAGAAGAGGATGACTTTTGGTTTCGTGGCTTCAACATGC
GCACCGGCGAGCGTGGAGTGTTCCCTGCCTTCTATGCCCATGCGGTACCGGGTCCTGCCAAGGACCTGCT
GGGGAGCAAGCGGAGCCCGTGCTGGGTGGATCGCTTCGATGTGCAGTTCTTGGGCTCCGTGGAGGTACCG
TGTCACCAGGGCAATGGGATCCTGTGTGCAGCCATGCAAAAGATTGCCACAGCCCGGAAACTAACGGTCC
ACCTGCGCCCTCCTGCCTCTTGTGACCTTGAGATCTCTCTGCGGGGGGTCAAGCTGAGTCTCAGTGGAGG
AGGACCTGAGTTCCAGCGCTGCAGCCACTTCTTCCAGATGAAGAACATCTCATTCTGTGGCTGTCATCCC
CGAAACAGCTGCTATTTTGGCTTCATCACCAAACACCCGCTGCTAAGCCGCTTTGCCTGCCACGTCTTTG
TGTCCCAGGAGTCTATGAGACCAGTGGCGCGGAGTGTGGGCCGGGCCTTCCTGGAGTACTACCAGGAGCA
CCTGGCGTTTGCCTGCCCTACAGAGGATATCTACCTGGAGTAG

Translation (830 aa):
MADRAEMFSLSTFHSLSPPGCRPPQDISLEEFDDEDLSEITDDCGLGLSYDSDHCEKDSLSLGRSEQPHP
ICSFQDDFQEFEMIDDNEEEDDEEEEEEEEEEEDGDRQGKAGGGPGSQALAGDSLIPSPSLEESHKLRPT
TLHLTTLGAQDSLNNNNGGFTSAPPSSWQETVLRSPAQEPLKELPAPLLPAEEERHEVQSLARPGCDCEG
NQPPEPPASSGGASPSSDPGIEADLRSHSSGGHEGRRSSQELSSPGSDSEDAGGARLGRMISSISETELE
LSSDGGSSSGRSSHLTNSIEEASSPASEPEPEPEPLHEPPRRPAFLPVGQDDTNSEYESGSESEPDLSED
ADSPWLLSNLVSRMISEGSSPIRCPGQCLSPAPRLPEEAASQANSVPQDCQDPEAGPHVELVDMDTLCGP
PPPAPAAPRLGPAQPGPCLFLSNPTRDTITPLWATPGRTARPGRSCSAACSEEEEEDEEEDEEDEEDAED
SVVPPGSRTTGSTAPLDASLVYDAVKYTLVVDEHTQLELVSLRRCAGLGNDSEEDSSCEASEEEAGATLL
GSDQVPEDASPDSPDLTFSKKFLNVFVNSTSRSSSTESFGLFSCVVNGEEREQTHRAVFRFIPRHPDELE
LDVDDPVLVEAEEDDFWFRGFNMRTGERGVFPAFYAHAVPGPAKDLLGSKRSPCWVDRFDVQFLGSVEVP
CHQGNGILCAAMQKIATARKLTVHLRPPASCDLEISLRGVKLSLSGGGPEFQRCSHFFQMKNISFCGCHP
RNSCYFGFITKHPLLSRFACHVFVSQESMRPVARSVGRAFLEYYQEHLAFACPTEDIYLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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