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Report for CCDS21430.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21430.1 Public Mus musculus 7 Or14c43 23 108 98 CCDS HistoryNCBI Gene:257929Re-query CCDS DB by CCDS ID:21430.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21430.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057734.3 ENSMUSP00000062434.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057734.3Link to Ensembl Protein Viewer:ENSMUSP00000062434.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000057734Re-query CCDS DB by Protein ID:ENSMUSP00000062434
Original member Current member EBI ENSMUST00000217253.1 ENSMUSP00000149038.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000217253.1Link to Ensembl Protein Viewer:ENSMUSP00000149038.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000217253Re-query CCDS DB by Protein ID:ENSMUSP00000149038
Original member Current member NCBI NM_001011767.1 NP_001011767.1 Accepted alive Link to Nucleotide Sequence:NM_001011767.1Link to Protein Sequence:NP_001011767.1Re-query CCDS DB by Nucleotide ID:NM_001011767Re-query CCDS DB by Protein ID:NP_001011767Link to BLAST:NP_001011767.1

Chromosomal Locations for CCDS 21430.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 86465413 86466405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGAACAATTCCACCCTGGTGACTGAGTTCCTCCTGGAGGTTTTTGCTGAGTCTTGCGAGCTCAGAATCC
TTCTCAGTGTGCTGTTCCTGCTGGTGTACCTGGGCAGCCTGTTCGGGAACCTTATCATCATCATTGTTAC
TACAGTTGACCAGACACTGAACACACCCATGTATTTCTTCCTCAGGAATCTGTCTATTGTAGACATGTGT
TATGTTTCTGTCACTGTCCCAAATGCTTGTTTCAACTCTCTCACTGGCCAGAGGAATATTTCTGTGACTG
GGTGTGCAGCACAAATCTTTTTTGTCTTCTTTTGTGCATGTGTAGAGATGTTTTTTCTCACCATCATGGC
CCAGGACCGCTATGTGGCCATCTGTAAGCCTCTGCTCTACCCTGTGATCATGAACCACCAGTTCTGTGTT
CAGATGACACTGGCTTCCCTACATAGCTCTCTTATCATTGCAAGTGTGCACACTTTCAAAACTTTCCAAC
TGTCCTTCTGTCACTCTAATGTGGTTCCTCAGTTCTTCTGTGATATCCCCTCTTTGTTGAAGCTTTCATG
TTCAGATACCTTTAACAACAAACTCTTAATGCTAATCTCTGCCATTATCATTGGTTGCAGCTGCTTTACA
TTCATTGCTGTATCATATTTTAGGATATTATCAACTGTGTTGAAGGTTCCTGTCAAAGGAGAGAGAGGGA
AAGCCTTTTCCACCTGTGTCCCTCACATTGTTGTGGTGTCTGTGTTTCTTAGTTCTTCTACCTATGTGTA
TCTAAGACCTCCAGTACCAACATTAGAAGTAGTTAAGGAGATGGCTCTTTCTGTGTCTTATACGATTGTC
CCACCATTCTTAAATCCTATCATCTATAGTCTTAGAAACAGACAGATAAAGGAGGCTGTGAAGAAAGTAA
TATTAAGAATTTCTTTGGTATTTGAATATAAAAGAAATGAGTATTTGTTAGAGTTTTCTAGAGTAAGAAA
GTTGAAAAAATAA

Translation (330 aa):
MNNSTLVTEFLLEVFAESCELRILLSVLFLLVYLGSLFGNLIIIIVTTVDQTLNTPMYFFLRNLSIVDMC
YVSVTVPNACFNSLTGQRNISVTGCAAQIFFVFFCACVEMFFLTIMAQDRYVAICKPLLYPVIMNHQFCV
QMTLASLHSSLIIASVHTFKTFQLSFCHSNVVPQFFCDIPSLLKLSCSDTFNNKLLMLISAIIIGCSCFT
FIAVSYFRILSTVLKVPVKGERGKAFSTCVPHIVVVSVFLSSSTYVYLRPPVPTLEVVKEMALSVSYTIV
PPFLNPIIYSLRNRQIKEAVKKVILRISLVFEYKRNEYLLEFSRVRKLKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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