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Report for CCDS16203.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16203.1 Public Mus musculus 2 Or5ak4 23 108 98 CCDS HistoryNCBI Gene:257951Re-query CCDS DB by CCDS ID:16203.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 16203.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099929.2 ENSMUSP00000097513.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099929.2Link to Ensembl Protein Viewer:ENSMUSP00000097513.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000099929Re-query CCDS DB by Protein ID:ENSMUSP00000097513
Original member Current member EBI ENSMUST00000111598.1 ENSMUSP00000107225.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111598.1Link to Ensembl Protein Viewer:ENSMUSP00000107225.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111598Re-query CCDS DB by Protein ID:ENSMUSP00000107225
Original member Current member EBI ENSMUST00000216347.1 ENSMUSP00000150619.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216347.1Link to Ensembl Protein Viewer:ENSMUSP00000150619.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216347Re-query CCDS DB by Protein ID:ENSMUSP00000150619
Original member Current member NCBI NM_001011785.1 NP_001011785.1 Accepted alive Link to Nucleotide Sequence:NM_001011785.1Link to Protein Sequence:NP_001011785.1Re-query CCDS DB by Nucleotide ID:NM_001011785Re-query CCDS DB by Protein ID:NP_001011785Link to BLAST:NP_001011785.1

Chromosomal Locations for CCDS 16203.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 85330967 85331896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAACAAAGTAATGACACCAAAGTGACTGAATTCATTCTTCTGGGATTTGCTGGGCAGCACAAGTCTT
GGCACATTCTGTTCATAATATTTCTAATGATCTATGTTGTCACACTCATGGGTAACATTGGAATGATCGT
ACTCATCAAAATTGATTCTTCTCTCCACACTCCCATGTACTTTTTCCTACAACATCTAGCCTTTGTTGAT
CTCTGCTATACCTCAGCTATTACTCCCAAGATGTTAAAAAACTTCACAGAGACAAAAGCTTCCATATCTT
TCATAGGATGTATGTTACAGCTACTAGCCTATGGTACTTTTGCAACCATCGACTGTTTCATCCTAGCTGC
TATGGCTGTGGACCGCTACGTGGCCATCTGTAACCCATTGCGCTATCCCATAGTCATGTCCCAGAGACTG
TGCATTCTGCTGCTGGTGGGTTCTTATACCATGGGCTTCCTAAATGCTTCTGTAAACACAAGTTTTACAT
TCTCACTGAAATTCTGCAAATCCAATGCCATTAATCACTTTTTCTGCGATGAGCCACCCATTCTTGCCCT
ATCATGCTCCAGTATTGACTTCAGTATCATGTTACTGACAGTTTTTGTGGGGTTCAACCTGTTGAGTACT
GTGCTGGTTGTCATCTTTTCTTACATATATATCTTGTCTGCCATCCTAAGGATGTCTTCTGCTGCAGGAA
GGAAAAAGGCCTTCTCCACATGTGCTTCCCACCTGACTGCAGTCACCATTTTCTATGGGACTCTTGCCTA
CATGTATCTACACCCTCATACCAATGACTCTCAGGAGCAAGAAAAGGCAGCTTCTGTATTTTATGGCATA
ATTATTCCCATGTTGAACCCCTTGATCTATAGTCTGAGAAACCAAGATGTAATAGAAGCCTTCAAAAAGA
TAGCGAAGAAATGCTTATAA

Translation (309 aa):
MEQSNDTKVTEFILLGFAGQHKSWHILFIIFLMIYVVTLMGNIGMIVLIKIDSSLHTPMYFFLQHLAFVD
LCYTSAITPKMLKNFTETKASISFIGCMLQLLAYGTFATIDCFILAAMAVDRYVAICNPLRYPIVMSQRL
CILLLVGSYTMGFLNASVNTSFTFSLKFCKSNAINHFFCDEPPILALSCSSIDFSIMLLTVFVGFNLLST
VLVVIFSYIYILSAILRMSSAAGRKKAFSTCASHLTAVTIFYGTLAYMYLHPHTNDSQEQEKAASVFYGI
IIPMLNPLIYSLRNQDVIEAFKKIAKKCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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