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Report for CCDS22994.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22994.1 Public Mus musculus 9 Or8b37 23 108 98 CCDS HistoryNCBI Gene:257996Re-query CCDS DB by CCDS ID:22994.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22994.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077732.1 ENSMUSP00000076912.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077732.1Link to Ensembl Protein Viewer:ENSMUSP00000076912.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000077732Re-query CCDS DB by Protein ID:ENSMUSP00000076912
Original member Current member EBI ENSMUST00000181088.3 ENSMUSP00000138035.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000181088.3Link to Ensembl Protein Viewer:ENSMUSP00000138035.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000181088Re-query CCDS DB by Protein ID:ENSMUSP00000138035
Original member Current member NCBI NM_001011798.1 NP_001011798.1 Accepted alive Link to Nucleotide Sequence:NM_001011798.1Link to Protein Sequence:NP_001011798.1Re-query CCDS DB by Nucleotide ID:NM_001011798Re-query CCDS DB by Protein ID:NP_001011798Link to BLAST:NP_001011798.1

Chromosomal Locations for CCDS 22994.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38047224 38048153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGCTTTAAGAAATGCCTCTTCAGTGAAAGAATTTATCTTGCTGGGATTGACACAGCAGCCAGGGCTCC
AGCTGCCGCTCTTCTTCCTGTTCTTGGGAATCTATGTGGTCTCCATGTTGGGGAACCTGGGCTTGATTGT
TCTGATTGTGTTGAATCCTCACCTGCACACCCCCATGTACTACTTTCTCTTCAACCTTTCCTTCATAGAT
CTCTGCTACTCCTCTGTCATAACCCCTAGAATGTTGGTGGGTTTTGTGAAGCAGAACATCATCTCTCATG
CTGAGTGCTTGACTCAGCTTTTTTTCTTTGCCTTCTTTGTTATTGATGAATGCTACATTTTGACAGCAAT
GGCTTATGACAGATATGCTGCCATTTGTAAGCCCCTGCTTTACCAGGTCACCATGTCTCATCAGGTCTGC
CTATTGATGACTATGGGTGTGTATGTGATGGGCTTTGCAGGTGCCTTGTCCCACATAGTTTGCATGCTGA
GACTCACCTTCTGTGATGGTAACATCATTAATCACTATGTTTGTGATGTACTTCCTCTCCTTAAACTCTC
CTGCACAAGTACCTCCATCAATGAGATGGTAGTTTTTATTGTTGTGGGTGTCAATGTGATAGTGCCCAGC
CTGACTCTCTTTGTTTCTTATACCTTAATCCTTTCCAACATCCTCAGCATCCATTCTGCAGAAGGTAGAT
CAAAAGCCTTCAGTACCTGTGGCTCCCATGTGATGGCTGTTTCTTTTTTCTTTGGAGCTGCAGCCTTCAT
GTATCTTAAGCCTTCTAGTGCATCTGTGGATGAAGAGAAATTATCTACCATCTTTTATACCATTTTGGGT
CCAATGCTGAATCCTTTCATCTACAGTATAAGGAATAAGGATGTCCATCTTGCACTGAGAAAAACATTGA
TGAAACTGAGGTTTTCCTAA

Translation (309 aa):
MALRNASSVKEFILLGLTQQPGLQLPLFFLFLGIYVVSMLGNLGLIVLIVLNPHLHTPMYYFLFNLSFID
LCYSSVITPRMLVGFVKQNIISHAECLTQLFFFAFFVIDECYILTAMAYDRYAAICKPLLYQVTMSHQVC
LLMTMGVYVMGFAGALSHIVCMLRLTFCDGNIINHYVCDVLPLLKLSCTSTSINEMVVFIVVGVNVIVPS
LTLFVSYTLILSNILSIHSAEGRSKAFSTCGSHVMAVSFFFGAAAFMYLKPSSASVDEEKLSTIFYTILG
PMLNPFIYSIRNKDVHLALRKTLMKLRFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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