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Report for CCDS26998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26998.1 Public Mus musculus 14 Or4n5 23 108 98 CCDS HistoryNCBI Gene:258487Re-query CCDS DB by CCDS ID:26998.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26998.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053290.7 ENSMUSP00000059721.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053290.7Link to Ensembl Protein Viewer:ENSMUSP00000059721.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000053290Re-query CCDS DB by Protein ID:ENSMUSP00000059721
Original member Current member NCBI NM_146494.2 NP_666705.1 Accepted alive Link to Nucleotide Sequence:NM_146494.2Link to Protein Sequence:NP_666705.1Re-query CCDS DB by Nucleotide ID:NM_146494Re-query CCDS DB by Protein ID:NP_666705Link to BLAST:NP_666705.1

Chromosomal Locations for CCDS 26998.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 49894874 49895800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGAGATCAAGAACAGCTCAGTAGTAACAGAATTCATCCTACTTGGCCTGACCCAGTCTCAAGAAGCTC
AACTCCTGGTCTTCGCACTGATTTCAGTTTTCTACCTAATAATTCTCCCTGGAAATTTTCTTATCATTTT
CACCATTAGATCAGACTCTGGACTCACAGCCCCACTTTACTTCTTTCTGGGAAACTTGGCATTCCTGGAT
GCCTCCTACTCTTTCATTGTAGCTCCTAGAATGCTTGTGGATTTCTTCTGTGAGAAAAAAGTCATTTCTT
ATAAAGCCTGCATCACTCAGCTATTCTTTCTGCACTTTCTTGGAGCAGGAGAAATGTTTCTTCTTGTTGT
GATGGCCGTTGATCGTTATATCGCTATATGCCGTCCTTTATACTACTCCACTCTCATGAACCCTAGAGTC
TGTTATGCCTTATTGTTGGCTCTGTGGCTTGGGGGTTTTGCTCATTCCATTGTACAAGTGGCTCTTATCC
TAAACTTGCCCTTTTGTGGGCCAAACCAGCTGGATAACTTTTTCTGTGATGTTCCACAGGTTGTAAAGCT
AGCCTGCACTGATACCTTTGCTGTGGAGCTCCTGATGGTTTCTAACAGTGGTCTACTTACCCTCTTATGC
TTCTTGGGACTTCTGGCCTCCTATGCTGTCATTCTCTACCACGTAAAAGGACATTCTTCTGAAGGGAAGA
GCAAAGCCATCTCTACATGCACCACCCATATTATAATTGTGTTTCTCATGTTTGGGCCTGCCATTTTTAT
CTATACCCGCCCCTTCCAGGCTCTCCAAGCTGACAAAGTTGTTTCCCTTTTCCACACGGTCATCTTTCCT
TTGATGAATCCTGTGATCTATACACTTCGCAACCAGGAAGTGAAAACTTCTATGAGGAAGTTGTTAAGTC
AGTATGTGATTTGCTGA

Translation (308 aa):
MEIKNSSVVTEFILLGLTQSQEAQLLVFALISVFYLIILPGNFLIIFTIRSDSGLTAPLYFFLGNLAFLD
ASYSFIVAPRMLVDFFCEKKVISYKACITQLFFLHFLGAGEMFLLVVMAVDRYIAICRPLYYSTLMNPRV
CYALLLALWLGGFAHSIVQVALILNLPFCGPNQLDNFFCDVPQVVKLACTDTFAVELLMVSNSGLLTLLC
FLGLLASYAVILYHVKGHSSEGKSKAISTCTTHIIIVFLMFGPAIFIYTRPFQALQADKVVSLFHTVIFP
LMNPVIYTLRNQEVKTSMRKLLSQYVIC


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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