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Report for CCDS51608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51608.1 Public Mus musculus 5 P2rx2 23 108 98 CCDS HistoryNCBI Gene:231602Re-query CCDS DB by CCDS ID:51608.1Re-query CCDS DB by GeneID:231602See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51608.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112478.7 ENSMUSP00000108097.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112478.7Link to Ensembl Protein Viewer:ENSMUSP00000108097.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000112478Re-query CCDS DB by Protein ID:ENSMUSP00000108097
Original member Current member NCBI NM_001164833.1 NP_001158305.1 Accepted alive Link to Nucleotide Sequence:NM_001164833.1Link to Protein Sequence:NP_001158305.1Re-query CCDS DB by Nucleotide ID:NM_001164833Re-query CCDS DB by Protein ID:NP_001158305Link to BLAST:NP_001158305.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158305.1 416 Q8K3P1-2 416 100% 0 0

Chromosomal Locations for CCDS 51608.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 110340193 110340297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340505 110340582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340668 110340733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110340856 110340949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341101 110341231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341551 110341689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110341774 110341854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342005 110342101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342178 110342253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342333 110342404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342500 110342635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110342780 110342955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1251 nt):
ATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCTTGGCCCGGGGCTGCTGGT
CCGCGTTCTGGGACTACGAGACGCCCAAGGTGATCGTGGTGCGGAATCGGCGCCTGGGATTCGTGCACCG
CATGGTGCAGCTGCTCATTCTGCTTTACTTCGTGTGGTACGTCTTCATCGTGCAGAAAAGCTACCAGGAT
AGCGAAACCGGTCCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCACCATGTCGGAACACAAAGTGT
GGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCATCATCACCAGGATCGAGGT
TACTCCTTCCCAGACCCTGGGAACATGCCCAGAGAGCATGAGGGTTCACAGCTCTACCTGCCATTTAGAT
GACGACTGTGTGGCCGGACAGCTGGACATGCAGGGCAATGGGATTCGGACAGGACGCTGTGTACCCTATT
ACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCTGGTGCCCGGTGGAGGATGGGACTTCTGAAAACCA
TTTTCTGGGTAAAATGGCCCCAAATTTCACCATCCTCATCAAGAACAGCATCCACTATCCCAAGTTCAAG
TTCTCCAAGGGCAACATTGCAAGCCAGAAGAGTGACTACCTGAAGCACTGCACGTTTGATCAGGACTCTG
ATCCATACTGTCCCATCTTCAGGCTGGGCTTCATTGTAGAGCAAGCAGGAGAGAACTTCACAGAACTGGC
ACACAAGGGCGGTGTCATTGGGGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGC
AACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCTTCAGGCTACAACTTCAGGT
TTGCCAAATATTACAAGATAAACGGCACCACCACCACTCGAACTCTCATCAAAGCCTATGGGATTCGAAT
TGACGTTATTGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCATCATCAATCTGGCCACTGCT
CTGACCTCCATCGGGGTGGGCTCCTTTCTGTGTGACTGGATTTTGTTAACGTTCATGAACAAAAACAAGC
TCTACAGCCATAAGAAGTTCGACAAGGTGGTGGACACTCTTGACCAGCATATGGGACAAAGGCCTCCTGT
CCCTGAGCCTTCCCAACAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACTTTGA

Translation (416 aa):
MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWYVFIVQKSYQD
SETGPESSIITKVKGITMSEHKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPESMRVHSSTCHLD
DDCVAGQLDMQGNGIRTGRCVPYYHGDSKTCEVSAWCPVEDGTSENHFLGKMAPNFTILIKNSIHYPKFK
FSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEQAGENFTELAHKGGVIGVIINWNCDLDLSESEC
NPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINLATA
LTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVVDTLDQHMGQRPPVPEPSQQDSTSTDPKGLAQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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