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Report for CCDS29653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29653.1 Public Mus musculus 19 Or5b108 23 108 98 CCDS HistoryNCBI Gene:258688Re-query CCDS DB by CCDS ID:29653.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29653.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076832.2 ENSMUSP00000076107.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076832.2Link to Ensembl Protein Viewer:ENSMUSP00000076107.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000076832Re-query CCDS DB by Protein ID:ENSMUSP00000076107
Original member Current member EBI ENSMUST00000208533.2 ENSMUSP00000147174.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208533.2Link to Ensembl Protein Viewer:ENSMUSP00000147174.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208533Re-query CCDS DB by Protein ID:ENSMUSP00000147174
Original member Current member NCBI NM_146693.1 NP_666904.1 Accepted alive Link to Nucleotide Sequence:NM_146693.1Link to Protein Sequence:NP_666904.1Re-query CCDS DB by Nucleotide ID:NM_146693Re-query CCDS DB by Protein ID:NP_666904Link to BLAST:NP_666904.1

Chromosomal Locations for CCDS 29653.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13190669 13191592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGAGAACACGACAGAAGTGACATGGTTTGTCTTGCTGGGACTCACCAATGACCCACAACTCCAGCTTC
CACTCTTCATTACCTTCCTCCTCATCTACATCATCACTCTGGTGGGGAACCTAGGGATTATCCTGTTGAT
TCTCTTGGACTCTAGGCTCCACACCCCCATGTACATTTTCTTGAGTAACCTGTCCTTAGTGGACTTCTGT
TATTCCTCAACAATCACTCCAAAGGTCATGGCTGGATTTCTTACAGGAGATAGGATCATATCTTATAATG
CTTGTGCCTCTCAGATGTTCTTTTTTGCACACTTTGCTGATGTGGAGAGCTACCTTTTAGTGTCCATGGC
CTATGATCATTATGTAGCAGTGTGTAAGCCCCTACATTATGCCACCACCATGACAACACACTTATGTGTT
TTTCTAGTTATTGGCTGTTACATTTGTGGTTTCCTGAATGCTTCCATCTATACAGTGGATGTATTTAGTC
TCTCCTTCTGTGAGTCCAATGTCATTCATCATTTTTTCTGTGATGTTCTAGCAGTCATGATAATATCTCG
CTCTGACAAATATATTAATGAACTGGTTCTTATTTCTGTAGCCAGTTTCAATATTATTTTTTCTCTTATA
CTCATCTTAATATCCTATATGTTCATTTTTACCAACATACTAAAGATAAACTCATCTGAAGGATATCGCA
AAGCTCTCTCCACTTGTACCTCACACTTTACAGCTGTCTTCATTTACTATGGGACTGTCATCTTCATGTA
CTTGCAGCCAACCTCCAGTCACTCCATGGACACTGACAAAATTGTGTCTGTGTTCTACTCCATTGTCATC
CCTATGTTGAACCCTCTGGTCTACAGCATGAGGAATAAGGAGGTGAAGAATGCATTCACAAAGGTTGTAT
TGAGGTCAAGGTAA

Translation (307 aa):
MENTTEVTWFVLLGLTNDPQLQLPLFITFLLIYIITLVGNLGIILLILLDSRLHTPMYIFLSNLSLVDFC
YSSTITPKVMAGFLTGDRIISYNACASQMFFFAHFADVESYLLVSMAYDHYVAVCKPLHYATTMTTHLCV
FLVIGCYICGFLNASIYTVDVFSLSFCESNVIHHFFCDVLAVMIISRSDKYINELVLISVASFNIIFSLI
LILISYMFIFTNILKINSSEGYRKALSTCTSHFTAVFIYYGTVIFMYLQPTSSHSMDTDKIVSVFYSIVI
PMLNPLVYSMRNKEVKNAFTKVVLRSR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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