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Report for CCDS16387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16387.1 Public Mus musculus 2 Or4a75 23 108 98 CCDS HistoryNCBI Gene:258787Re-query CCDS DB by CCDS ID:16387.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16387.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000216129.1 ENSMUSP00000150117.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216129.1Link to Ensembl Protein Viewer:ENSMUSP00000150117.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216129Re-query CCDS DB by Protein ID:ENSMUSP00000150117
Original member Current member NCBI NM_146791.2 NP_667002.2 Accepted alive Link to Nucleotide Sequence:NM_146791.2Link to Protein Sequence:NP_667002.2Re-query CCDS DB by Nucleotide ID:NM_146791Re-query CCDS DB by Protein ID:NP_667002Link to BLAST:NP_667002.2

Chromosomal Locations for CCDS 16387.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 89617267 89618190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGGACAGAATAACAATGTTACAGAGTTTATCCTCCTGGGTCTCACTCAGGATCCTGCTGGGCAAAAAG
TATTGTTTGTCATGTTTTTACTCATCTACATTGTGAAAATAGTGGGCAACCTGCTCATTGTGGGGACAGT
GATTGCCAGCCCCTCCTTGGGCTCCCCAATGTACTTTTTCCTTGCCTTTCTTTCACTCATGGATGCTGTT
TATTCTACTGCCATCTTGCCCAAGTTGCTTACAGATTTACTTTGTGATAAGAAGACCATCTCCTTCACAG
CTTGTCTGGTTCAGCTTTTTGTGGAGCACTTATTTGGTGGTTCTGAGGTCTTCATTTTGGTGGTGATGGC
CTATGATCACTATGTGGCCATCTGTAAGCCACTGCACTATCTGACCATAATGAAACGGCAGGTTTGCATT
CTCTTGGTGGTGGTGTCCTGGGCTGGAGGATTTGCACATGCTCTGCTTCAAGTTATCTCTGTGTATTTAC
TTCCTTTTTGTGGACCCAATGTCATTGACCATTTTGCTTGTGACATATACCCATTGTTAGGACTTGCATG
TACTGACACTTACTTCCTTGGACTCACTGTAGTTAGCAGTTATGGAGCAATGTCTATAGTGGCCTTTATC
CTCCTTCTTGTCTCCTATGGAATCATTCTAAACTCTCTTAAGACTGATAGTCAGGAAGGGAGGCGCAAAG
CCCTGTCCACCTGCAGCTCCCACATCATGGTGGTTGTCCTCTTTTTTGTTCCCTGTATTTTCATGTATGT
TAGACCTATCTCCAACTTTCCAATTGATAAATATATAACTGTCTTTTATACAATTTTTACTCCCATGTTG
AACCCTTTAATATATACCTTGAGAAACATGGAGATTAAAAATTGTATGGCAAAGCTGTGGAGTAAAATGT
TCACTAAAGCATAA

Translation (307 aa):
MGQNNNVTEFILLGLTQDPAGQKVLFVMFLLIYIVKIVGNLLIVGTVIASPSLGSPMYFFLAFLSLMDAV
YSTAILPKLLTDLLCDKKTISFTACLVQLFVEHLFGGSEVFILVVMAYDHYVAICKPLHYLTIMKRQVCI
LLVVVSWAGGFAHALLQVISVYLLPFCGPNVIDHFACDIYPLLGLACTDTYFLGLTVVSSYGAMSIVAFI
LLLVSYGIILNSLKTDSQEGRRKALSTCSSHIMVVVLFFVPCIFMYVRPISNFPIDKYITVFYTIFTPML
NPLIYTLRNMEIKNCMAKLWSKMFTKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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