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Report for CCDS21598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21598.1 Public Mus musculus 7 Or51ai2 23 108 98 CCDS HistoryNCBI Gene:259123Re-query CCDS DB by CCDS ID:21598.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098189.3 ENSMUSP00000095791.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098189.3Link to Ensembl Protein Viewer:ENSMUSP00000095791.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000098189Re-query CCDS DB by Protein ID:ENSMUSP00000095791
Original member Current member EBI ENSMUST00000214711.1 ENSMUSP00000149598.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214711.1Link to Ensembl Protein Viewer:ENSMUSP00000149598.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214711Re-query CCDS DB by Protein ID:ENSMUSP00000149598
Original member Current member NCBI NM_147119.1 NP_667330.1 Accepted alive Link to Nucleotide Sequence:NM_147119.1Link to Protein Sequence:NP_667330.1Re-query CCDS DB by Nucleotide ID:NM_147119Re-query CCDS DB by Protein ID:NP_667330Link to BLAST:NP_667330.1

Chromosomal Locations for CCDS 21598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103937382 103938335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGAAGGTGTCTATTCCACCACGTGCCAACTTCAGCTACGCTATATTTTTGCTCACCGGCTTCCCAGGTC
TGGAATGGGCTCATCATTGGATTTCACTGCCCATATTTATGGGGTATTTTGTAGCCATCATGGGTAATGC
CACTATCTTGCATCTGGTTCGAACTGACCCTTCCCTCCACCAGCCCATGTACTACTTCCTGGCCATCTTG
GCCGTGACAGACCTGGGCTTATGCATGTCAACGCTGCCTTCTGTGCTGGGGGTGTTATGGTTTGATGCCC
GGATGGTGGGTCTGGTGCCCTGTGTGCTCCAGCAGCACTTCCTCCACTCTTTCTCCTTCATGGAATCAGC
AGTGCTATTTGCTATGGCTCTGGACCGTCTGATAGCAATCCGATTCCCGCTGCGCTATGCATCTGTGCTC
ACTGGGCCCCGTGTGGCATTGATAGGCACGGTGCTGGGTATGCGGAGTGCAGCTATTACAGCCGCACCCT
CACTACATCTACTGACATTTGACTACTGTCACCCTGGTGCTCTCTCCCATGCCTATTGTCTTCATCAGGA
CATGATCCGTCTGGCCTGTTCTGACACCCGCTTCAACAGACTCTATGGACTGTGCATCATCATGCTAGCC
ATGGGTTCAGATGTCCTCTTCATCCTGCTCTCCTACGCTGTCATCCTCCGCACAGTGCTGGCCATTGCCT
CTGCAGGGGAGAGGCTCAAGGCCCTCAACACGTGCGTCTCCCACATCCTGGCTGTACTCTGTTTTTATGT
TCCTGTTCTGGGCCTGTCCATTGTGCACAGATTTGGACAGCACACCTCACCCCTGGTGCACATCCTAATG
GGCACAGTGTCTGTGCTTTTTCCACCCGTGATGAACCCTGTTATCTACAGCATCAAGACCCAACAGATCC
GCAGGGCCATTGTCAAGGTGATTTCACTGGGTAAGATTCAGTAA

Translation (317 aa):
MKVSIPPRANFSYAIFLLTGFPGLEWAHHWISLPIFMGYFVAIMGNATILHLVRTDPSLHQPMYYFLAIL
AVTDLGLCMSTLPSVLGVLWFDARMVGLVPCVLQQHFLHSFSFMESAVLFAMALDRLIAIRFPLRYASVL
TGPRVALIGTVLGMRSAAITAAPSLHLLTFDYCHPGALSHAYCLHQDMIRLACSDTRFNRLYGLCIIMLA
MGSDVLFILLSYAVILRTVLAIASAGERLKALNTCVSHILAVLCFYVPVLGLSIVHRFGQHTSPLVHILM
GTVSVLFPPVMNPVIYSIKTQQIRRAIVKVISLGKIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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