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Report for CCDS7846.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7846.1 Public Homo sapiens 11 MRGPRX1 24 110 108 CCDS HistoryNCBI Gene:259249Re-query CCDS DB by CCDS ID:7846.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7846.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302797.4 ENSP00000305766.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000302797.4Link to Ensembl Protein Viewer:ENSP00000305766.3Re-query CCDS DB by Nucleotide ID:ENST00000302797Re-query CCDS DB by Protein ID:ENSP00000305766
Original member Current member EBI ENST00000526914.2 ENSP00000499076.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000526914.2Link to Ensembl Protein Viewer:ENSP00000499076.2Re-query CCDS DB by Nucleotide ID:ENST00000526914Re-query CCDS DB by Protein ID:ENSP00000499076
Original member Current member NCBI NM_001393578.1 NP_001380507.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393578.1Link to Protein Sequence:NP_001380507.1Re-query CCDS DB by Nucleotide ID:NM_001393578Re-query CCDS DB by Protein ID:NP_001380507Link to BLAST:NP_001380507.1
Original member Current member NCBI NM_147199.4 NP_671732.3 Accepted alive Link to Nucleotide Sequence:NM_147199.4Link to Protein Sequence:NP_671732.3Re-query CCDS DB by Nucleotide ID:NM_147199Re-query CCDS DB by Protein ID:NP_671732Link to BLAST:NP_671732.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380507.1 322 Q96LB2 322 100% 0 0
NP_671732.3 322 Q96LB2 322 100% 0 0

Chromosomal Locations for CCDS 7846.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 18933816 18934784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGATCCAACCATCTCAACCTTGGACACAGAACTGACACCAATCAACGGAACTGAGGAGACTCTTTGCT
ACAAGCAGACCTTGAGCCTCACGGTGCTGACGTGCATCGTTTCCCTTGTCGGGCTGACAGGAAACGCAGT
TGTGCTCTGGCTCCTGGGCTGCCGCATGCGCAGGAACGCCTTCTCCATCTACATCCTCAACTTGGCCGCA
GCAGACTTCCTCTTCCTCAGCGGCCGCCTTATATATTCCCTGTTAAGCTTCATCAGTATCCCCCATACCA
TCTCTAAAATCCTCTATCCTGTGATGATGTTTTCCTACTTTGCAGGCCTGAGCTTTCTGAGTGCCGTGAG
CACCGAGCGCTGCCTGTCCGTCCTGTGGCCCATCTGGTACCGCTGCCACCGCCCCACACACCTGTCAGCG
GTGGTGTGTGTCCTGCTCTGGGCCCTGTCCCTGCTGCGGAGCATCCTGGAGTGGATGTTATGTGGCTTCC
TGTTCAGTGGTGCTGATTCTGCTTGGTGTCAAACATCAGATTTCATCACAGTCGCGTGGCTGATTTTTTT
ATGTGTGGTTCTCTGTGGGTCCAGCCTGGTCCTGCTGATCAGGATTCTCTGTGGATCCCGGAAGATACCG
CTGACCAGGCTGTACGTGACCATCCTGCTCACAGTACTGGTCTTCCTCCTCTGTGGCCTGCCCTTTGGCA
TTCAGTTTTTCCTATTTTTATGGATCCACGTGGACAGGGAAGTCTTATTTTGTCATGTTCATCTAGTTTC
TATTTTCCTGTCCGCTCTTAACAGCAGTGCCAACCCCATCATTTACTTCTTCGTGGGCTCCTTTAGGCAG
CGTCAAAATAGGCAGAACCTGAAGCTGGTTCTCCAGAGGGCTCTGCAGGACGCGTCTGAGGTGGATGAAG
GTGGAGGGCAGCTTCCTGAGGAAATCCTGGAGCTGTCGGGAAGCAGATTGGAGCAGTGA

Translation (322 aa):
MDPTISTLDTELTPINGTEETLCYKQTLSLTVLTCIVSLVGLTGNAVVLWLLGCRMRRNAFSIYILNLAA
ADFLFLSGRLIYSLLSFISIPHTISKILYPVMMFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSA
VVCVLLWALSLLRSILEWMLCGFLFSGADSAWCQTSDFITVAWLIFLCVVLCGSSLVLLIRILCGSRKIP
LTRLYVTILLTVLVFLLCGLPFGIQFFLFLWIHVDREVLFCHVHLVSIFLSALNSSANPIIYFFVGSFRQ
RQNRQNLKLVLQRALQDASEVDEGGGQLPEEILELSGSRLEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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