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Report for CCDS17684.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17684.1 Public Mus musculus 3 Mab21l3 23 108 98 CCDS HistoryNCBI Gene:242125Re-query CCDS DB by CCDS ID:17684.1Re-query CCDS DB by GeneID:242125See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17684.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061831.10 ENSMUSP00000059212.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061831.10Link to Ensembl Protein Viewer:ENSMUSP00000059212.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000061831Re-query CCDS DB by Protein ID:ENSMUSP00000059212
Original member Current member EBI ENSMUST00000118411.1 ENSMUSP00000112730.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118411.1Link to Ensembl Protein Viewer:ENSMUSP00000112730.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000118411Re-query CCDS DB by Protein ID:ENSMUSP00000112730
Original member Current member NCBI NM_172295.4 NP_758499.3 Accepted alive Link to Nucleotide Sequence:NM_172295.4Link to Protein Sequence:NP_758499.3Re-query CCDS DB by Nucleotide ID:NM_172295Re-query CCDS DB by Protein ID:NP_758499Link to BLAST:NP_758499.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_758499.3 429 Q8CI17 429 100% 0 0

Chromosomal Locations for CCDS 17684.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 101815019 101815252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101818623 101818817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101819366 101819544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101823240 101823531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101826731 101826871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 101834994 101835242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1290 nt):
ATGGCAGATGAATTCTTCCATGCTGGAAAGGAAAACTGCAGTGAGCAGGCAAGAAGAAGTCAAGTCTCTG
GTCCACGTTCACAATTCCAGAGAAGTTTTATCCAGAGAGTAACGTTGCTGGGAAAGCTACCCACCAGATT
TGTCCTCCATCGGGAAAGAAAGCAGAAGGTTGCTGCTATACTGGGGGTTGACCAAGAAGCCATGAAGTCT
CTTCCAGAGGGAGACTTAGACCATTGCCTGCTGAGCAAGGTGGACCTGAGGCGGCAGCAGATTTCTCAGA
CCATGGAGGAGGTGCAGAAAATCATCCACCTGCTAACCACAGAAATCAGCCGCCAGGACAGTCGTTTCGA
AGCCGTGCCTGTCTCTGACACACACAACGAGAGCATTAAGGTTTTGGCCCCCAGCCTCTTCCATGTCACC
GTCCCACTGAAAGGCCTTGCAGGGTACAAGGGGGTCCAGAGGCAGCGCTGGCGGTACTACAATGTGCAGG
GCGCCAAGCTCACCTGCCCTCTGCGGGACCCCGAAGGCCTGCAACAGTGGCTGGAGACTGAGATGTTCAT
GAAGACCCTGTGGCAGTGGCACAAGGCAGATGTGAACATTGAGGGGGACATTGTGCCAGCCAAAGTCCTG
CAGGTGTTCCGGACGCTGGTGGAAAATGCAGTGAGAACCTGTCACCTCTCAGGCAAAGTCACTGTGCTAG
AAAAACGCACTACGGTTTGGGTTGCCATGGAAACGTCCACAGGCCAGGTGGAGCTGGAGCTGGCCCCCAC
CGTGGAGATCCCCACCACCTGGCCTGAGAAAGCCCAGTGGCCTCGGTGTCTGAAGCGATGGCCTTCCCCA
GAGAGAGTGGAGTGCATCAAGTCCTTTGGGTTTAACTTGGTGGCCCAGTCCGCCTATCACTGGCAGCTGA
GTTTCTCCCAGGCAGAGCAGGTGCTGTTTGAGCAGCTGGACGAGGATGGAGGCTGCCGCAGGCAATGCTT
TCAGGTCCTGAGGCAGCTGAAGGAGGATGTGTGGTGTCCAGGGAGGAGGCCAGTCATCACCACCCACCAC
CTGCAGACCGTGCTCTTCTGGACTTGTGAGAAATACCCCCACCTCAAGGATTGGCAGGTCTTCCATCAAG
CCCTCCTGCGCCTCGTCCGGAAGCTGCACAGGTGTGTGAGCCAGCACTTCCTGAAGCACTATTTTGTTCC
AAAGAGCAACCTCCTTCAGTCAGCTAACCCAAGCGAGCTGGATGCGGTGGCCCAGAAAGTGGCCTTTTTC
CTAAAGAACCCGCAGGTTGAGCTGCCCTGA

Translation (429 aa):
MADEFFHAGKENCSEQARRSQVSGPRSQFQRSFIQRVTLLGKLPTRFVLHRERKQKVAAILGVDQEAMKS
LPEGDLDHCLLSKVDLRRQQISQTMEEVQKIIHLLTTEISRQDSRFEAVPVSDTHNESIKVLAPSLFHVT
VPLKGLAGYKGVQRQRWRYYNVQGAKLTCPLRDPEGLQQWLETEMFMKTLWQWHKADVNIEGDIVPAKVL
QVFRTLVENAVRTCHLSGKVTVLEKRTTVWVAMETSTGQVELELAPTVEIPTTWPEKAQWPRCLKRWPSP
ERVECIKSFGFNLVAQSAYHWQLSFSQAEQVLFEQLDEDGGCRRQCFQVLRQLKEDVWCPGRRPVITTHH
LQTVLFWTCEKYPHLKDWQVFHQALLRLVRKLHRCVSQHFLKHYFVPKSNLLQSANPSELDAVAQKVAFF
LKNPQVELP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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