NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS54718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54718.1 Public Homo sapiens 4 EVC2 24 110 108 CCDS HistoryNCBI Gene:132884Re-query CCDS DB by CCDS ID:54718.1Re-query CCDS DB by GeneID:132884See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000310917.6 ENSP00000311683.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000310917.6Link to Ensembl Protein Viewer:ENSP00000311683.2Re-query CCDS DB by Nucleotide ID:ENST00000310917Re-query CCDS DB by Protein ID:ENSP00000311683
Original member Current member NCBI NM_001166136.2 NP_001159608.1 Accepted alive Link to Nucleotide Sequence:NM_001166136.2Link to Protein Sequence:NP_001159608.1Re-query CCDS DB by Nucleotide ID:NM_001166136Re-query CCDS DB by Protein ID:NP_001159608Link to BLAST:NP_001159608.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159608.1 1228 Q86UK5-2 1228 100% 0 0

Chromosomal Locations for CCDS 54718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 5562848 5563115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5565258 5565359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5568444 5568640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5574685 5574772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5576240 5576454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5584623 5584850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5615422 5615544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5618478 5618682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5622537 5622991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5625749 5625908 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5628559 5628734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5631793 5632032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5640514 5640838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5663107 5663246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5665515 5665649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5681260 5681313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5685370 5685479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5689157 5689343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5691265 5691333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5694335 5694501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 5697593 5697635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3687 nt):
ATGATTTGGCCCAAAGTGGAATGCTGTCACTTTAAGACTGCAGTGGAAGCACCACTTGGAATGAAATTGG
ACAAGAAAATGGAAGTCTTCATCCCACTCTCAACTTCTGCAGCCTCTAGTGGGCCATGGGCTCATTCCTT
ATTTGCTTTTATACCCTCCTGGCCTAAGAAGAACTTATTTAAAAGAGAGTCTCCTATAACACACCGCCTG
TATGGGGACATTTCAAGAGAAGTTCAAGGGACTTCTGAAAATGGAGTAATTTTTCAGAAATGTGCACTGG
TGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTC
AGCCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATTGCTGGTCTCACCATTTGGGACTCTGTGGGAAAC
AGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTTGCTGTCAGCT
ACGCAGCCACGCTCCAGGCTGGAGACCTCGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAACTCACCTT
TCAGAGCTCGTCACGGAACAGAACACAGCTGAAAGTGCTTTTTTCCATAACAGCAGAAGAAAACGTAACG
GTTCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCTCCCTTGTGCTGACCT
GGGCTGCCCTCTTCCTCATGGTTCGCTATCAGTGTCTGAAGGGAAACATGCTCACCAGACATCGGGTTTG
GCAGTATGAGAGCAAGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAATGAGGACCTTTCCCTT
AACGACCAAATGATAGACATTCTGTCTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTTGG
AGATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGATATCAT
TGCCCTTCTGCTGAAAAATCTCACCAGCAGTGGCCACCTCTCACCCCAAGTAGAGAGAAAAATGAGTGCT
GTTTTCAAAAAGCAGTTTCTATTGCTGGAAAATGAAATACAAGAGGAGTACGATCGGAAGATGGTGGCAT
TGACAGCTGAATGTGACCTGGAAACAAGAAAGAAGATGGAAAACCAGTACCAGAGAGAGATGATGGCAAT
GGAGGAAGCAGAAGAGTTGCTGAAACGTGCTGGTGAGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGG
ACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCA
AAGCTCACAGACAGCTGGCTGTTTTCCAGAGAAATGAACTGCACAGTATCTTTTTTACCCAGATAAAAAG
TGCTATTTTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATGCTGCTGCAAAATTATTCTAAAATACAG
GAGAATGTAGAAGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATTTGGCC
ACAGGGAATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGC
AGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGATGAAGACCAAATGGAAATG
CTATTGGAGCGGGCTCAGACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGAAA
AGAAAAAGCTCCACCAAAAATTAATAACTAAGAGAAGACGAGAGTTGCTACAAAAGCACAGGGAGCAGCG
TAGGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAG
AGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCAGGCCGCCCTGG
ACGATCTCAGGACCCTGACCCTTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGCGCCTGCAGAACTC
AGCCATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGAGCAC
GGCAAGGAGATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGAGAGGGACAGGGACCAGGAGGGTGTCC
AGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG
CTGGGAGCACCTGATCTTCATGAAGCTCTGCTCCTCAGTCTTCTCCCTGTCTGAAGAGGAGCTGCTCAGG
ATGAGGCAGGAGGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCC
GAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAGGCCGTGGC
TGCCCCTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTT
CTGAAGAAGTGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTGGAAAAGG
TTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTTGCACAGTCGCT
TGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTACACCGCCCTCCTCAGC
ATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCC
TGGAGTCGCACAGCCGGGAGCTCCAGGAGTTGGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGAGGC
AGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGGGCCCGGGATTCTGAACGAA
CCTGGGGAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAGACAT
TACTGGAGCAACATCAGCAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTGCTAGAAGACTTGTTGGA
AAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGG
ATGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGCCTC
AGCTGCTGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGGCGGAGC
GGAGCAGGCCGACGTGGGCAGGCGGAGGAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGA
GGAGATCTGATAAGCAGAGGATTAGAAAAGATGCTGTGGGCCCGCAAGAGAAAGCAGAGCATATTAAAGA
AGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACACCTGTCACTGGA
GCCCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAACACAGGAGAG
AAGCTCTTTATATTCAGAAATCCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAAAAAGAAGA
ACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAG

Translation (1228 aa):
MIWPKVECCHFKTAVEAPLGMKLDKKMEVFIPLSTSAASSGPWAHSLFAFIPSWPKKNLFKRESPITHRL
YGDISREVQGTSENGVIFQKCALVSGSSEAQTARIWLLVNNTKTTSSANLSELLLLDSIAGLTIWDSVGN
RTSEGFQAFSKKFLQVGDAFAVSYAATLQAGDLGNGESLKLPAQLTFQSSSRNRTQLKVLFSITAEENVT
VLPHHGLHAAGFFIAFLLSLVLTWAALFLMVRYQCLKGNMLTRHRVWQYESKLEPLPFTSADGVNEDLSL
NDQMIDILSSEDPGSMLQALEELEIATLNRADADLEACRTQISKDIIALLLKNLTSSGHLSPQVERKMSA
VFKKQFLLLENEIQEEYDRKMVALTAECDLETRKKMENQYQREMMAMEEAEELLKRAGERSAVECSNLLR
TLHGLEQEHLRKSLALQQEEDFAKAHRQLAVFQRNELHSIFFTQIKSAIFKGELKPEAAKMLLQNYSKIQ
ENVEELMDFFQASKRYHLSKRFGHREYLVQNLQSSETRVQGLLSTAAAQLTHLIQKHERAGYLDEDQMEM
LLERAQTEVFSIKQKLDNDLKQEKKKLHQKLITKRRRELLQKHREQRREQASVGEAFRTVEDAGQYLHQK
RSLMEEHGATLEELQERLDQAALDDLRTLTLSLFEKATDELRRLQNSAMTQELLKRGVPWLFLQQILEEH
GKEMAARAEQLEGEERDRDQEGVQSVRQRLKDDAPEAVTEEQAELRRWEHLIFMKLCSSVFSLSEEELLR
MRQEVHGCFAQMDRSLALPKIRARVLLQQFQTAWREAEFVKLDQAVAAPELQQQSKVRKSRSKSKSKGEL
LKKCIEDKIHLCEEQASEDLVEKVRGELLRERVQRMEAQEGGFAQSLVALQFQKASRVTETLSAYTALLS
IQDLLLEELSASEMLTKSACTQILESHSRELQELERKLEDQLVQQEAAQQQQALASWQQWVADGPGILNE
PGEVDSERQVSTVLHQALSKSQTLLEQHQQCLREEQQNSVVLEDLLENMEADTFATLCSQELRLASYLAR
MAMVPGATLRRLLSVVLPTASQPQLLALLDSATERHVDHAAESDGGAEQADVGRRRKHQSWWQALDGKLR
GDLISRGLEKMLWARKRKQSILKKTCLPLRERMIFSGKGSWPHLSLEPIGELAPVPIVGAETIDLLNTGE
KLFIFRNPKEPEISLHVPPRKKKNFLNAKKAMRALGMD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH