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Report for CCDS30291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30291.1 Public Mus musculus X Gpr165 23 108 98 CCDS HistoryNCBI Gene:76206Re-query CCDS DB by CCDS ID:30291.1Re-query CCDS DB by GeneID:76206See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30291.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033554.4 ENSMUSP00000033554.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033554.4Link to Ensembl Protein Viewer:ENSMUSP00000033554.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033554Re-query CCDS DB by Protein ID:ENSMUSP00000033554
Original member Current member NCBI NM_029536.3 NP_083812.1 Accepted alive Link to Nucleotide Sequence:NM_029536.3Link to Protein Sequence:NP_083812.1Re-query CCDS DB by Nucleotide ID:NM_029536Re-query CCDS DB by Protein ID:NP_083812Link to BLAST:NP_083812.1

Chromosomal Locations for CCDS 30291.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 96713997 96714455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 96715074 96715199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 96716254 96716387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 96716838 96717486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1368 nt):
ATGGATGCTCCAACCACAGACGTGCCCCCAGAGGATTTCCAGAGCCCTGGCACCATGGGCTTTGGGGACG
AGCTGACTCCAGAAGCTCTGAGTGTACCTAGTGGTTTTGATGACTTGATCACTTCTACCACCTCCCAGGT
GCTTCAGGCTGCATCCAATGCTGGCCGCAATGGCATGCTGTCAAAGATGGATAAGTTGGCAGACCACATG
TCAAACTCGGGGGACCTGGCTGACACATCGGGTCCCCTAGATTTGGAAATTGTATCCCAGGATGAGCAGG
TGCAATTCTGGTTAGTGGTAGGGTACACCATAGTGGTCTTTGCTGCCATCATAGGCAACTGGGTCTTAAA
CCACATAATTATGAAGTATAAGAGGGTACACACTGCCACCGGCCTCTTCGTTGTCAACATTTCTGTGACC
AACATGATGCTCGCTCTTCTCAGCTCTCCCTTCACTATGGTGCGCTATCTGTGTAATTCCTTGGTGTTTG
GAAAGATGACATGTCACCTCAGTCGCTTTGCCCAGTACTCATGTGCCTATGTAACTGTGATGAGCATGGC
AGCTATTTCTCTGGATCGACATAGGGTGATGCTATATCCTCTGAAGGCCCGGATTACTCCCATGCAAGGC
AATGTTTGCATCATCATCATCTGGATCGTGAGCACTTGTGCTGCTTTGCCTCATGCCGTTTACCAGAAGC
TTTACCAAGTAGAATTTGGCAACACAACAGAGGAATCTGCCTGCCTCCCAAGTTTCCCATATACTTCTAA
ATCCACGTGGAAATACCTTGACCTGGGCACCTTTCTGCTGTTCTTTATCTTGCCTTTGCTGGTTCTGGTG
GCTGTCTATGGTCATGTGGCCAAAAAGCTGTGGATCCATGATGCTGTTGATGACATCAATATCCACACTT
ACATCTGCCAGCGTGGGAAGAAGAAGCAGACCCTAAAGATGCTGATGACAGTGGTGCTTCTGTATACAAT
CAGCTGGCTCCCCCTCAACGTGTACCTGGTGCTCCTGTCCAGTGAATCCATCTCAAGCCACAATGGTCTC
TACTTTTTCCTCCACTGGCTAGCAATTAGTAGTTCCTGCTACAACCCCTACATTTATTGCTGGCTCAGTG
ATAGTTTCCGTATTGAAGTTCAGAAAGTCATCATGGAAATCCAGAAGATGCTACTAGATAAAATCAGCCG
CCTCAGGGGAGAGCATCGCCGACTGAGCTCTGTATCTCACAGCCAAACCCCTGGCAGTGTGGATCCCAAT
CCAGGAGTGCCCAAATTCCCACGATTCAGAGATTTTGATGAGCTGCCCAGTCCCCCTCCCTCCCCAACAG
TGGAAATCTCCTTTCTCCATTCAGTGCCTAGAGTTTAA

Translation (455 aa):
MDAPTTDVPPEDFQSPGTMGFGDELTPEALSVPSGFDDLITSTTSQVLQAASNAGRNGMLSKMDKLADHM
SNSGDLADTSGPLDLEIVSQDEQVQFWLVVGYTIVVFAAIIGNWVLNHIIMKYKRVHTATGLFVVNISVT
NMMLALLSSPFTMVRYLCNSLVFGKMTCHLSRFAQYSCAYVTVMSMAAISLDRHRVMLYPLKARITPMQG
NVCIIIIWIVSTCAALPHAVYQKLYQVEFGNTTEESACLPSFPYTSKSTWKYLDLGTFLLFFILPLLVLV
AVYGHVAKKLWIHDAVDDINIHTYICQRGKKKQTLKMLMTVVLLYTISWLPLNVYLVLLSSESISSHNGL
YFFLHWLAISSSCYNPYIYCWLSDSFRIEVQKVIMEIQKMLLDKISRLRGEHRRLSSVSHSQTPGSVDPN
PGVPKFPRFRDFDELPSPPPSPTVEISFLHSVPRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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