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Report for CCDS40782.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40782.1 Public Mus musculus 9 Prss44 23 108 98 CCDS HistoryNCBI Gene:73336Re-query CCDS DB by CCDS ID:40782.1Re-query CCDS DB by GeneID:73336See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40782.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098345.2 ENSMUSP00000095948.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098345.2Link to Ensembl Protein Viewer:ENSMUSP00000095948.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000098345Re-query CCDS DB by Protein ID:ENSMUSP00000095948
Original member Current member NCBI NM_148940.3 NP_683742.2 Accepted alive Link to Nucleotide Sequence:NM_148940.3Link to Protein Sequence:NP_683742.2Re-query CCDS DB by Nucleotide ID:NM_148940Re-query CCDS DB by Protein ID:NP_683742Link to BLAST:NP_683742.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683742.2 372 Q402U7-1 372 100% 0 0

Chromosomal Locations for CCDS 40782.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 110814039 110814348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110814600 110814756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110815293 110815552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110816417 110816571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 110817089 110817325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGCCTTCCAGGGCTGTGACTGCTTCGGCCTTTTGGTCTGGCTCTTGCTGCTTCAGACGCGATTGGGCA
AGGCTCGTATGGTTCCAGGGACGCCGTCTCTTTCTCCTCTCCCCTCAGAGAATGGCCTAGATGACTCGGG
TGTAAACCCACAAGAGAGGCCACTCACAGGGATGCCTGAGACCTCGTTGCCCCGCAAGCCTGGGGACAGC
ACGAGGCCCCTTGATTCGATGGCATTTACTCCAGGTCAATCTTTTTCAACCATGAGTCTGTCAAGACAAC
CGTTTCCAACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGAAGGCC
TGCGCCAGCGAGGAAGTGGCCGTGGCAGGTGAGCCTGCAGGTCCACAAGCAGCACATCTGTGGTGGCTCC
CTCATCAGCAAATGGTGGGTGATTACAGCAGCCCACTGTGTATATGGACATCTGGATTATGCAGTGTTCA
TGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATCGTTCACCAGGA
TTTCTCCATGATGAGAACAGTTGTTCATGACATCGCCCTTGTTCTGCTGGCCTTCCCTGTGAATTACAGC
GTCAACATCCAGCCCGTGTGCATCCCTGAAAAGTCTTTCTTGGTACAACCTGGGACGCTATGCTGGGTGA
CCGGATGGGGCAAAGTACTTGAACAAGGTAGGTCGTCGAGAATACTGCAGGAGATTGAGCTGAATATTAT
CCGTCATGAGAAATGTAACCAGATTCTCAAGGACATCATGGGGAATATATTTACCCTGGTCCAGGAAGGG
GGAGTCTGTGGCTATAATGAGAAAGGAGGAGATGCCTGCCAGGGAGATTCTGGGGGCCCCCTGGTCTGCG
AATTTAATAAAACGTGGGTGCAGGTAGGGATCGTGAGCTGGGGTCTTGGCTGTGGCCGAATTGGATACCC
TGGAGTTTATACAGAAGTGAGTTACTACAGAGACTGGATCATTAAAGAACTGAGTCGGGCTTCGTGTTGG
AAGCTATCAGGCTTCCTCGTCTTAAGCGTGTGTCTGGTGCTTCACCTGGCCATCGTGGTGGCCCTATGA

Translation (372 aa):
MAFQGCDCFGLLVWLLLLQTRLGKARMVPGTPSLSPLPSENGLDDSGVNPQERPLTGMPETSLPRKPGDS
TRPLDSMAFTPGQSFSTMSLSRQPFPTWVPPTSACGHRTARIVGGRPAPARKWPWQVSLQVHKQHICGGS
LISKWWVITAAHCVYGHLDYAVFMGDADLWSKRPVRIPVQDIIVHQDFSMMRTVVHDIALVLLAFPVNYS
VNIQPVCIPEKSFLVQPGTLCWVTGWGKVLEQGRSSRILQEIELNIIRHEKCNQILKDIMGNIFTLVQEG
GVCGYNEKGGDACQGDSGGPLVCEFNKTWVQVGIVSWGLGCGRIGYPGVYTEVSYYRDWIIKELSRASCW
KLSGFLVLSVCLVLHLAIVVAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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